RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 RMDN1Q96DB5 314 aa18.85■□□□□ 0.61
PKD1-229ENST00000564890 CALR3Q96L12 384 aaKnown RBP18.85■□□□□ 0.61
PKD1-229ENST00000564890 ORAI3Q9BRQ5 295 aa18.85■□□□□ 0.61
PKD1-229ENST00000564890 CPEB1Q9BZB8 566 aaKnown RBP18.85■□□□□ 0.61
PKD1-229ENST00000564890 EBF2Q9HAK2 575 aa18.85■□□□□ 0.61
PKD1-229ENST00000564890 TM9SF3Q9HD45 589 aa18.85■□□□□ 0.61
PKD1-229ENST00000564890 SEPT3Q9UH03 358 aa18.85■□□□□ 0.61
PKD1-229ENST00000564890 TPX2Q9ULW0 747 aaKnown RBP18.85■□□□□ 0.61
PKD1-229ENST00000564890 PJA2O43164 708 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 RNGTTO60942 597 aaKnown RBP18.84■□□□□ 0.61
PKD1-229ENST00000564890 MAP3K6O95382 1288 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 PIGNO95427 931 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 PEX11BO96011 259 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 SDHBP21912 280 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 MAT2AP31153 395 aaKnown RBP18.84■□□□□ 0.61
PKD1-229ENST00000564890 GARSP41250 739 aaKnown RBP18.84■□□□□ 0.61
PKD1-229ENST00000564890 MAPK8P45983 427 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 CSNK1DP48730 415 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 RENBPP51606 427 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 LIMK1P53667 647 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 GBE1Q04446 702 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 ZNF235Q14590 738 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 STPG1Q5TH74 334 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 SRLQ86TD4 932 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 TRIM69Q86WT6 500 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 TXLNBQ8N3L3 684 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 NSMCE1Q8WV22 266 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 GTPBP2Q9BX10 602 aaKnown RBP18.84■□□□□ 0.61
PKD1-229ENST00000564890 MAK16Q9BXY0 300 aaKnown RBP18.84■□□□□ 0.61
PKD1-229ENST00000564890 GRPEL1Q9HAV7 217 aa18.84■□□□□ 0.61
PKD1-229ENST00000564890 ARHGAP33O14559 1287 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 APOL1O14791 398 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 MUSKO15146 869 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 LATO43561 262 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 PCDH8O95206 1070 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 SYPP08247 313 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 ABL2P42684 1182 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 ID4P47928 161 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 AFF3P51826 1226 aaKnown RBP18.83■□□□□ 0.6
PKD1-229ENST00000564890 GRM3Q14832 879 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 NEK5Q6P3R8 708 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 MFSD7Q6UXD7 560 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 PRPF39Q86UA1 669 aaKnown RBP18.83■□□□□ 0.6
PKD1-229ENST00000564890 RFX6Q8HWS3 928 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 PLD5Q8N7P1 536 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 SLC6A18Q96N87 628 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 PSKH2Q96QS6 385 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 TUBGCP5Q96RT8 1024 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 TMEM9BQ9NQ34 198 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 FADS3Q9Y5Q0 445 aa18.83■□□□□ 0.6
PKD1-229ENST00000564890 A0A1W2PQU0 124 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 GOLGA6L3A6NEY3 463 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 C4orf47A7E2U8 309 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 CDX4O14627 284 aaPredicted RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 SLC30A4O14863 429 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 AP1G1O43747 822 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 MX2P20592 715 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 HSPA9P38646 679 aaKnown RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 MARCKSL1P49006 195 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 CSNK1EP49674 416 aaKnown RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 SCNN1BP51168 640 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 ATXN3P54252 364 aaPredicted RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 RACK1P63244 317 aaKnown RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 NSUN2Q08J23 767 aaKnown RBP eCLIP18.82■□□□□ 0.6
PKD1-229ENST00000564890 KIF5AQ12840 1032 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 SLC10A2Q12908 348 aaPredicted RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 GRIK2Q13002 908 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 TEAD4Q15561 434 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 IFI16Q16666 785 aaKnown RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 SLC9A4Q6AI14 798 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 LAYNQ6UX15 382 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 HORMAD1Q86X24 394 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 BBS5Q8N3I7 341 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 RAB7BQ96AH8 199 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 SERAC1Q96JX3 654 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 ZNF830Q96NB3 372 aaPredicted RBP18.82■□□□□ 0.6
PKD1-229ENST00000564890 ATP13A3Q9H7F0 1226 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 AASDHPPTQ9NRN7 309 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 DLL3Q9NYJ7 618 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 DTLQ9NZJ0 730 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 DKK3Q9UBP4 350 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 TRIM10Q9UDY6 481 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
PKD1-229ENST00000564890 PCDH15Q96QU1 1955 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 CACNA1EQ15878 2313 aa18.82■□□□□ 0.6
PKD1-229ENST00000564890 SHROOM3Q8TF72 1996 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 DMXL1Q9Y485 3027 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 ADAMTS9Q9P2N4 1935 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 A0A0U1RQJ8 604 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 A0A1B0GVT2 93 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 MACROD2A1Z1Q3 448 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 GJB3O75712 270 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 ZFXP17010 805 aaPredicted RBP18.81■□□□□ 0.6
PKD1-229ENST00000564890 NUDT1P36639 197 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 MMP13P45452 471 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 GRIA4P48058 902 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 DYNLT1P63172 113 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 SETMARQ53H47 684 aaPredicted RBP18.81■□□□□ 0.6
PKD1-229ENST00000564890 LRRC73Q5JTD7 316 aa18.81■□□□□ 0.6
PKD1-229ENST00000564890 MARC1Q5VT66 337 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms