RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TPGS1Q6ZTW0 290 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 SH2D5Q6ZV89 423 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 WFDC5Q8TCV5 224 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 BCAS4Q8TDM0 211 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 DENND1AQ8TEH3 1009 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 BHMTQ93088 406 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 ACDQ96AP0 544 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 SERAC1Q96JX3 654 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 PIDD1Q9HB75 910 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 MSRAQ9UJ68 235 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 GBF1Q92538 1859 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 ZWINTO95229 277 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 CD160O95971 181 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 FGF1P05230 155 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 ATXN1LP0C7T5 689 aaKnown RBP19.78■□□□□ 0.76
CLN6-205ENST00000564846 RAB30Q15771 203 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 SIRPB2Q5JXA9 342 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 TEDDM1Q5T9Z0 273 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 TIFABQ6ZNK6 161 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 ZNF778Q96MU6 729 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 NUDCD1Q96RS6 583 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 NOD2Q9HC29 1040 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 SCUBE2Q9NQ36 999 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 NSMCE4AQ9NXX6 385 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 IL1RAPL1Q9NZN1 696 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 TBC1D14Q9P2M4 693 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 MRPS23Q9Y3D9 190 aaKnown RBP19.78■□□□□ 0.76
CLN6-205ENST00000564846 ARIH1Q9Y4X5 557 aaPredicted RBP19.78■□□□□ 0.76
CLN6-205ENST00000564846 HMX2A2RU54 273 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 TM9SF1O15321 606 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 GJB3O75712 270 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 TMCC1O94876 653 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 PAPLNO95428 1278 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 RPA3P35244 121 aaPredicted RBP19.77■□□□□ 0.76
CLN6-205ENST00000564846 SCNN1BP51168 640 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 SEC24CP53992 1094 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 NSUN2Q08J23 767 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLN6-205ENST00000564846 MSLNQ13421 630 aaPredicted RBP19.77■□□□□ 0.76
CLN6-205ENST00000564846 SLC12A1Q13621 1099 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 HSP90AA5PQ58FG0 334 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 PPP2R2DQ66LE6 453 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 RETSATQ6NUM9 610 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 NLRP9Q7RTR0 991 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 SMG7Q92540 1137 aaKnown RBP19.77■□□□□ 0.76
CLN6-205ENST00000564846 APOPT1Q96IL0 206 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 NKX2-4Q9H2Z4 354 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 TREX1Q9NSU2 369 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 VPS51Q9UID3 782 aa19.77■□□□□ 0.76
CLN6-205ENST00000564846 HELZP42694 1942 aaKnown RBP19.76■□□□□ 0.75
CLN6-205ENST00000564846 GOLGA8RI6L899 631 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 RFPL1O75677 317 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 PAPSS2O95340 614 aaPredicted RBP19.76■□□□□ 0.75
CLN6-205ENST00000564846 FAM107AO95990 144 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 RGRP47804 291 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 NRIP1P48552 1158 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 PLK1P53350 603 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 IL9RQ01113 521 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 LAMB3Q13751 1172 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 BMPR2Q13873 1038 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 ZNF77Q15935 545 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 MROH9Q5TGP6 573 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 LINGO4Q6UY18 593 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 TAX1BP1Q86VP1 789 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 ABHD8Q96I13 439 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 KLF6Q99612 283 aaPredicted RBP19.76■□□□□ 0.75
CLN6-205ENST00000564846 SLC17A6Q9P2U8 582 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 PSAT1Q9Y617 370 aa19.76■□□□□ 0.75
CLN6-205ENST00000564846 CXorf51AA0A1B0GTR3 108 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 PRAMEF12O95522 483 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 ASMTLO95671 621 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 NDST3O95803 873 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 PYGBP11216 843 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 CEBPBP17676 345 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 LMAN2Q12907 356 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 USP4Q13107 963 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 SEPT6Q14141 434 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 RALGPS1Q5JS13 557 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 KIAA0930Q6ICG6 404 aaPredicted RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 ESRP1Q6NXG1 681 aaKnown RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 STRA8Q7Z7C7 330 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 METTL3Q86U44 580 aaKnown RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 RIN3Q8TB24 985 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 CKAP2Q8WWK9 683 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 OTUB2Q96DC9 234 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 CHMP6Q96FZ7 201 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 TRIB3Q96RU7 358 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 CDCA3Q99618 268 aaPredicted RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 MLXIPLQ9NP71 852 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 PLK2Q9NYY3 685 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 NDUFAB1O14561 156 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 ITGA2BP08514 1039 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 ALADP13716 330 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 SPRP35270 261 aaPredicted RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 CCNFP41002 786 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 CSE1LP55060 971 aaKnown RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 WDR4P57081 412 aaKnown RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 SEPT7Q16181 437 aaKnown RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 APCDD1Q8J025 514 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 ZNF557Q8N988 423 aaPredicted RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 TCP10LQ8TDR4 215 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms