RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PPP1R15BQ5SWA1 713 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
CLN6-204ENST00000564752 SCYL2Q6P3W7 929 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 PARS2Q7L3T8 475 aaKnown RBP18.79■□□□□ 0.6
CLN6-204ENST00000564752 SLFN11Q7Z7L1 901 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 DCBLD1Q8N8Z6 715 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 VCPIP1Q96JH7 1222 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 CNPY3Q9BT09 278 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 EDEM3Q9BZQ6 932 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 TM6SF2Q9BZW4 377 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 MAGEH1Q9H213 219 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 ZDHHC6Q9H6R6 413 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 CLCA2Q9UQC9 943 aa18.79■□□□□ 0.6
CLN6-204ENST00000564752 POM121BA6NF01 834 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 C16orf96A6NNT2 1141 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 RAD51BO15315 384 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 FFAR2O15552 330 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 TLX3O43711 291 aaPredicted RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 CKMT1AP12532 417 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 GKP32189 559 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 EIF2S3P41091 472 aaKnown RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 UBASH3AP57075 661 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 GEMIN4P57678 1058 aaKnown RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 DAB2P98082 770 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 FIGNQ5HY92 759 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 KYAT3Q6YP21 454 aaKnown RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 ZNF571Q7Z3V5 609 aaPredicted RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 PTAR1Q7Z6K3 402 aaPredicted RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 VOPP1Q96AW1 172 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 DCBLD2Q96PD2 775 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 LENG8Q96PV6 779 aaPredicted RBP18.78■□□□□ 0.6
CLN6-204ENST00000564752 C1QTNF2Q9BXJ5 285 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 PARVAQ9NVD7 372 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 NLGN3Q9NZ94 848 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 CHD5Q8TDI0 1954 aa18.78■□□□□ 0.6
CLN6-204ENST00000564752 SPTY2D1-AS1A0A0U1RR47 76 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 NEMP2A6NFY4 417 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 SCAMP1O15126 338 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 ATMINO43313 823 aaPredicted RBP18.77■□□□□ 0.6
CLN6-204ENST00000564752 TSPAN6O43657 245 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 GSRP00390 522 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 MT-CO3P00414 261 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 ALPPL2P10696 532 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 HNRNPKP61978 463 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLN6-204ENST00000564752 SGCGQ13326 291 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 FZD2Q14332 565 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 MYLK3Q32MK0 819 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 ZNF805Q5CZA5 627 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 ZNF542PQ5EBM4 170 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
CLN6-204ENST00000564752 OR2AP1Q8NGE2 309 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 RAB7BQ96AH8 199 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 CRELD1Q96HD1 420 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 KLF6Q99612 283 aaPredicted RBP18.77■□□□□ 0.6
CLN6-204ENST00000564752 DNAJC28Q9NX36 388 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 HPCAL4Q9UM19 191 aa18.77■□□□□ 0.6
CLN6-204ENST00000564752 GCN1Q92616 2671 aaKnown RBP18.77■□□□□ 0.59
CLN6-204ENST00000564752 IGLON5A6NGN9 336 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 EIF4E1BA6NMX2 242 aaKnown RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 KDELR3O43731 214 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 RAMP2O60895 175 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 POP4O95707 220 aaKnown RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 CSF2P04141 144 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 ABL2P42684 1182 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 ABCG1P45844 678 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 RABIFP47224 123 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 AIF1P55008 147 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 SNRPD1P62314 119 aaKnown RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 MAMLD1Q13495 774 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 POLD3Q15054 466 aaPredicted RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 SKOR2Q2VWA4 1001 aaPredicted RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 TDRD12Q587J7 1177 aaKnown RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 LEKR1Q6ZMV7 388 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 FAM181AQ8N9Y4 354 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 OR6K2Q8NGY2 324 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 ASB12Q8WXK4 309 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 APOLD1Q96LR9 279 aa18.76■□□□□ 0.59
CLN6-204ENST00000564752 BBC3Q96PG8 261 aaPredicted RBP18.76■□□□□ 0.59
CLN6-204ENST00000564752 LY6G6EA0A0G2JKS1 128 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 K7ESM1 405 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 KRIT1O00522 736 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 DDX3XO00571 662 aaKnown RBP eCLIP18.75■□□□□ 0.592e-13■■■□□ 16.8
CLN6-204ENST00000564752 FPGTO14772 594 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 GZMAP12544 262 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 SKILP12757 684 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 NME1P15531 152 aaKnown RBP18.75■□□□□ 0.59
CLN6-204ENST00000564752 PSMA2P25787 234 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 ITPKBP27987 946 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 EPHB2P29323 1055 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 OGDHQ02218 1023 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 CDCP2Q5VXM1 449 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 PLEKHA7Q6IQ23 1121 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 KDM7AQ6ZMT4 941 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 DNAAF5Q86Y56 855 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 PYROXD2Q8N2H3 581 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms