RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 BTN2A2Q8WVV5 523 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 GDAP1L1Q96MZ0 367 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 CPEB1Q9BZB8 566 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 TTYH3Q9C0H2 523 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 RAB6CQ9H0N0 254 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 FZD10Q9ULW2 581 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 NEU3Q9UQ49 428 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 CLCA2Q9UQC9 943 aa12.37□□□□□ -0.43
GTF3C1-204ENST00000564664 FAM170AA1A519 330 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 POM121BA6NF01 834 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 IGLON5A6NGN9 336 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 AREL1O15033 823 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 SDC3O75056 442 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 GJB6O95452 261 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 IGSF6O95976 241 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 TNFAIP3P21580 790 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 ZNF135P52742 658 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 NDST2P52849 883 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 CLDN2P57739 230 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 YPEL5P62699 121 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 DAB2P98082 770 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 SERINC3Q13530 473 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 FGL2Q14314 439 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 NCAPHQ15003 741 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 GDPD4Q6W3E5 623 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 APTXQ7Z2E3 356 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 IRF2BP2Q7Z5L9 587 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 PTAR1Q7Z6K3 402 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 PARGQ86W56 976 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 MARCH9Q86YJ5 346 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 TBATAQ96M53 351 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 KLF6Q99612 283 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 MYOCQ99972 504 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 NCAPGQ9BPX3 1015 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 TM6SF2Q9BZW4 377 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 FZD3Q9NPG1 666 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 PARVAQ9NVD7 372 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 DNAJC28Q9NX36 388 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 AK5Q9Y6K8 562 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 LAMA5O15230 3695 aa12.36□□□□□ -0.43
GTF3C1-204ENST00000564664 ATRXP46100 2492 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 TMEM110-MUSTN1A8MSY1 372 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 RASA4BC9J798 803 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 TPP1O14773 563 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 CCP110O43303 1012 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 RASA4O43374 803 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 TMCC1O94876 653 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 MT-CO3P00414 261 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 UGT2B4P06133 528 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 GZMAP12544 262 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 NME1P15531 152 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 PFN3P60673 137 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 FZD2Q14332 565 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 COL28A1Q2UY09 1125 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 FILIP1LQ4L180 1135 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 PDZD3Q86UT5 571 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 ZNF354CQ86Y25 554 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 PSTKQ8IV42 348 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 SLC22A18ASQ8N1D0 253 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 HNRNPLLQ8WVV9 542 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 CENPTQ96BT3 561 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 ZNF641Q96N77 438 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 KLHL32Q96NJ5 620 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 HSD3B7Q9H2F3 369 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 NOL6Q9H6R4 1146 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 UCKL1Q9NWZ5 548 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 RALYQ9UKM9 306 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 ACTL7AQ9Y615 435 aa12.35□□□□□ -0.43
GTF3C1-204ENST00000564664 K7ESM1 405 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 RAD51BO15315 384 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 RRP8O43159 456 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 CREB3O43889 395 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 TM7SF2O76062 418 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 TIMP2P16035 220 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 ABL2P42684 1182 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 CSNK1DP48730 415 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 PEX5P50542 639 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 RHOAP61586 193 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 RPL7AP62424 266 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 ELP6Q0PNE2 266 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 MAMLD1Q13495 774 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 CDCP2Q5VXM1 449 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 ZCCHC8Q6NZY4 707 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 C19orf48Q6RUI8 117 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 LRRC69Q6ZNQ3 347 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms