RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 SYNJ2BP-COX16A0A087WUM0 186 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SYCE1LA8MT33 242 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 KCNK1O00180 336 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF195O14628 629 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SLC7A4O43246 635 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 HNRNPRO43390 633 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 BUD23O43709 281 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 DNAJA2O60884 412 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 GMNNO75496 209 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 LYPLA1O75608 230 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SRP72O76094 671 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 IPO13O94829 963 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 TMCC1O94876 653 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 MAP3K6O95382 1288 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NPPAP01160 153 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 JCHAINP01591 159 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 CYP11A1P05108 521 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 UBTFL6P0CB48 400 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SMPD1P17405 629 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 PSMC3P17980 439 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 TYMPP19971 482 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 HOXC13P31276 330 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 GRIA1P42261 906 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NAGLUP54802 743 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NRLP54845 237 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 TUBA4AP68366 448 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SMARCB1Q12824 385 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 TRIM25Q14258 630 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NFE2Q16621 373 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 LSM12Q3MHD2 195 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 ARL13AQ5H913 290 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NAIF1Q69YI7 327 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 KRT80Q6KB66 452 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 RWDD4Q6NW29 188 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NEPROQ6NW34 567 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 BRICD5Q6PL45 260 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 FRMD7Q6ZUT3 714 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 GPR142Q7Z601 462 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SNX32Q86XE0 403 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 CROCCP3Q8IVE0 287 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NUP93Q8N1F7 819 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 AADATQ8N5Z0 425 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 ATP6V0D2Q8N8Y2 350 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 LEMD2Q8NC56 503 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 C2CD4AQ8NCU7 369 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 ANKK1Q8NFD2 765 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 HM13Q8TCT9 377 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 PYDC1Q8WXC3 89 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 RSPH1Q8WYR4 309 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 EME1Q96AY2 570 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 CCDC124Q96CT7 223 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 DUS3LQ96G46 650 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 MAELQ96JY0 434 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 PPP1R10Q96QC0 940 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 PPP1R16BQ96T49 567 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 CDRT15Q96T59 188 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 IL12RB2Q99665 862 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 APBA2Q99767 749 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 EIF2AQ9BY44 585 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 OXCT2Q9BYC2 517 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 YTHDF1Q9BYJ9 559 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 SLC25A51Q9H1U9 297 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 NXF3Q9H4D5 531 aaKnown RBP7.71□□□□□ -1.18
ATXN3-249ENST00000564606 ARNT2Q9HBZ2 717 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 COX16Q9P0S2 106 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 CROTQ9UKG9 612 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 PPM1HQ9ULR3 514 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 TRPV2Q9Y5S1 764 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
ATXN3-249ENST00000564606 CCL15-CCL14A0A0B4J2E2 113 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 C2orf71A6NGG8 1288 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 AQP12BA6NM10 295 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 PSMD12O00232 456 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 IFRD1O00458 451 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 NOL3O60936 208 aaKnown RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 CLASP2O75122 1294 aaKnown RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 SKAP2O75563 359 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 RTN3O95197 1032 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 SNAI1O95863 264 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 EPOP01588 193 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 PYGLP06737 847 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 UMPSP11172 480 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 ENO3P13929 434 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 CPB1P15086 417 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 AKAP5P24588 427 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 LMO2P25791 158 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 SLC7A1P30825 629 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 LEPRP48357 1165 aaKnown RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 SERPINH1P50454 418 aaKnown RBP7.7□□□□□ -1.18
ATXN3-249ENST00000564606 SCNN1GP51170 649 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 INHBCP55103 352 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 PRAMEP78395 509 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 NFKB2Q00653 900 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 CCNIQ14094 377 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 GRM3Q14832 879 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 RPS6KA2Q15349 733 aa7.7□□□□□ -1.18
ATXN3-249ENST00000564606 CCL15Q16663 113 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms