RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 EMC10Q5UCC4 262 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 PRPF39Q86UA1 669 aaKnown RBP19.02■□□□□ 0.64
SPNS1-206ENST00000564476 SFTPA1Q8IWL2 248 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 PPIL6Q8IXY8 311 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 SIX5Q8N196 739 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 ZNF687Q8N1G0 1237 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 HCAR2Q8TDS4 363 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 ZNF641Q96N77 438 aaPredicted RBP19.02■□□□□ 0.64
SPNS1-206ENST00000564476 HEPHQ9BQS7 1158 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 FRMD8Q9BZ67 464 aaPredicted RBP19.02■□□□□ 0.64
SPNS1-206ENST00000564476 TM6SF2Q9BZW4 377 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 ATP13A3Q9H7F0 1226 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 NOD2Q9HC29 1040 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 LTB4R2Q9NPC1 389 aa19.02■□□□□ 0.64
SPNS1-206ENST00000564476 DMGDHQ9UI17 866 aaKnown RBP19.02■□□□□ 0.64
SPNS1-206ENST00000564476 CHURC1-FNTBB4DL54 471 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 ATG13O75143 517 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 SOCS5O75159 536 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 SUN1O94901 812 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 SEC31AO94979 1220 aaKnown RBP19.01■□□□□ 0.63
SPNS1-206ENST00000564476 CHRM1P11229 460 aaPredicted RBP19.01■□□□□ 0.63
SPNS1-206ENST00000564476 TPSB2P20231 275 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 MCM3P25205 808 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 TIE1P35590 1138 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 TNNT3P45378 269 aaPredicted RBP19.01■□□□□ 0.63
SPNS1-206ENST00000564476 RGRP47804 291 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 VPS41P49754 854 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 SKOR1P84550 965 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 SLC7A5Q01650 507 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 DSC2Q02487 901 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 ELAVL3Q14576 367 aaKnown RBP19.01■□□□□ 0.63
SPNS1-206ENST00000564476 MORF4L2Q15014 288 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 TPSAB1Q15661 275 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 C9orf64Q5T6V5 341 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 DPY19L3Q6ZPD9 716 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 Q6ZVU0 165 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 DSG4Q86SJ6 1040 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 LINC00523Q86TU6 105 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 IL17RCQ8NAC3 791 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 MCUQ8NE86 351 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 OR8D1Q8WZ84 308 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 EDAQ92838 391 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 OSBPL1AQ9BXW6 950 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 TNKS2Q9H2K2 1166 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 LRRC40Q9H9A6 602 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 EPB41L5Q9HCM4 733 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 NDRG2Q9UN36 371 aaKnown RBP19.01■□□□□ 0.63
SPNS1-206ENST00000564476 SNX24Q9Y343 169 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 ATG2BQ96BY7 2078 aa19.01■□□□□ 0.63
SPNS1-206ENST00000564476 FAM170BA6NMN3 283 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 SYNCRIPO60506 623 aaKnown RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 AP2A1O95782 977 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 PRNPP04156 253 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 EPHX1P07099 455 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 MMP2P08253 660 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RHOXF2BP0C7M4 288 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 CD72P21854 359 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 SERPINA4P29622 427 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 CD86P42081 329 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RPL21P46778 160 aaKnown RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 LMAN1P49257 510 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 CCNHP51946 323 aaPredicted RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 SEC13P55735 322 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RPL26P61254 145 aaKnown RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 BCL2L1Q07817 233 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 SIGLEC14Q08ET2 396 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 CAMK2GQ13555 558 aaPredicted RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 CUL1Q13616 776 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 STARD3Q14849 445 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 C2orf27AQ580R0 203 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 ATXN7L2Q5T6C5 722 aaPredicted RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 IZUMO3Q5VZ72 239 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 KCTD11Q693B1 232 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 NAPEPLDQ6IQ20 393 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RYBPQ8N488 228 aaPredicted RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 GPR161Q8N6U8 529 aaKnown RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 TMIEQ8NEW7 156 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 CPT1BQ92523 772 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 SPOCK2Q92563 424 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 EXOC2Q96KP1 924 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RBM15Q96T37 977 aaKnown RBP eCLIP19■□□□□ 0.63
SPNS1-206ENST00000564476 RHOXF2Q9BQY4 288 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 FOXP3Q9BZS1 431 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 TRIM31Q9BZY9 425 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 LMAN1LQ9HAT1 526 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 GDF3Q9NR23 364 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 CACNA2D2Q9NY47 1150 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 EVLQ9UI08 416 aaPredicted RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 ANAPC5Q9UJX4 755 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RPL26L1Q9UNX3 145 aaKnown RBP19■□□□□ 0.63
SPNS1-206ENST00000564476 SHOC2Q9UQ13 582 aa19■□□□□ 0.63
SPNS1-206ENST00000564476 RNF40O75150 1001 aa18.99■□□□□ 0.63
SPNS1-206ENST00000564476 APRTP07741 180 aa18.99■□□□□ 0.63
SPNS1-206ENST00000564476 PRKCHP24723 683 aa18.99■□□□□ 0.63
SPNS1-206ENST00000564476 TARSP26639 723 aaKnown RBP18.99■□□□□ 0.63
SPNS1-206ENST00000564476 KCNJ11Q14654 390 aa18.99■□□□□ 0.63
SPNS1-206ENST00000564476 RNASEH2BQ5TBB1 312 aaKnown RBP18.99■□□□□ 0.63
SPNS1-206ENST00000564476 HIBCHQ6NVY1 386 aaPredicted RBP18.99■□□□□ 0.63
SPNS1-206ENST00000564476 KDELC1Q6UW63 502 aa18.99■□□□□ 0.63
SPNS1-206ENST00000564476 PPP1R21Q6ZMI0 780 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms