RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 GDF3Q9NR23 364 aa20.14■□□□□ 0.81
CMTM3-207ENST00000564060 SPTLC3Q9NUV7 552 aa20.14■□□□□ 0.81
CMTM3-207ENST00000564060 INTUQ9ULD6 942 aa20.14■□□□□ 0.81
CMTM3-207ENST00000564060 CABIN1Q9Y6J0 2220 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 C16orf96A6NNT2 1141 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 J3KR12 359 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 YKT6O15498 198 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 FLRT2O43155 660 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 TSPAN6O43657 245 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 AKT2P31751 481 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 CYTH1Q15438 398 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF423Q2M1K9 1284 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 INAVAQ3KP66 663 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 TMCO4Q5TGY1 634 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 LAYNQ6UX15 382 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 NAXDQ8IW45 347 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 MAP7D3Q8IWC1 876 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 FAM174AQ8TBP5 190 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 KLHL32Q96NJ5 620 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF599Q96NL3 588 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 DKK3Q9UBP4 350 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 LHX3Q9UBR4 397 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 IPO11Q9UI26 975 aaKnown RBP20.13■□□□□ 0.81
CMTM3-207ENST00000564060 FNDC3AQ9Y2H6 1198 aaKnown RBP20.13■□□□□ 0.81
CMTM3-207ENST00000564060 PCDHB9Q9Y5E1 797 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 FADS3Q9Y5Q0 445 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 SPTBN2O15020 2390 aa20.13■□□□□ 0.81
CMTM3-207ENST00000564060 A0A1W2PR77 199 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 TLR4O00206 839 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 RNF103O00237 685 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 NEMP1O14524 444 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 HNRNPA2B1P22626 353 aaKnown RBP20.12■□□□□ 0.81
CMTM3-207ENST00000564060 AMPD1P23109 780 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 GKP32189 559 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 RENBPP51606 427 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 SUOXP51687 545 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 PDK2Q15119 407 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 CFAP58Q5T655 872 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 TXNRD3NBQ6F5E7 133 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 BBS5Q8N3I7 341 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 SLC35G2Q8TBE7 412 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 FAM71BQ8TC56 605 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 HCAR2Q8TDS4 363 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 NSMCE1Q8WV22 266 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 RFFLQ8WZ73 363 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 TSC1Q92574 1164 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 EXOC2Q96KP1 924 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 TUBGCP5Q96RT8 1024 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF670Q9BS34 389 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 RBSNQ9H1K0 784 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 IL21RQ9HBE5 538 aa20.12■□□□□ 0.81
CMTM3-207ENST00000564060 LUC7LQ9NQ29 371 aaKnown RBP20.12■□□□□ 0.81
CMTM3-207ENST00000564060 SLC31A1O15431 190 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 MTA2O94776 668 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 GJC1P36383 396 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 CSNK1DP48730 415 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ARRB1P49407 418 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF75DP51815 510 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF284Q2VY69 593 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 TMEM259Q4ZIN3 620 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ZFYVE27Q5T4F4 411 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 N4BP2L1Q5TBK1 243 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-207ENST00000564060 LRRC49Q8IUZ0 686 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ATPAF2Q8N5M1 289 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 TC2NQ8N9U0 490 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 KCTD6Q8NC69 237 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF641Q96N77 438 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ELF4Q99607 663 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-207ENST00000564060 CALN1Q9BXU9 219 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 ERVMER34-1Q9H9K5 563 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 SEPT3Q9UH03 358 aa20.11■□□□□ 0.81
CMTM3-207ENST00000564060 GIPC1O14908 333 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 SH3BP5O60239 455 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 PCDHGA12O60330 932 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 WNT1P04628 370 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 XPAP23025 273 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-207ENST00000564060 SERPINA4P29622 427 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 HSPA9P38646 679 aaKnown RBP20.1■□□□□ 0.81
CMTM3-207ENST00000564060 NXPH1P58417 271 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 NSUN2Q08J23 767 aaKnown RBP eCLIP20.1■□□□□ 0.81
CMTM3-207ENST00000564060 MESDQ14696 234 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 TTC7BQ86TV6 843 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 CCDC170Q8IYT3 715 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 TMEM145Q8NBT3 493 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 SETD7Q8WTS6 366 aaKnown RBP20.1■□□□□ 0.81
CMTM3-207ENST00000564060 SLC17A9Q9BYT1 436 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 ATP13A3Q9H7F0 1226 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 LRRK1Q38SD2 2015 aa20.1■□□□□ 0.81
CMTM3-207ENST00000564060 A0A1B0GTQ1 180 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 H0Y8X5 98 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 PRLRP16471 622 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 CYLC1P35663 651 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-207ENST00000564060 ABL2P42684 1182 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 ELP6Q0PNE2 266 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 SGCGQ13326 291 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 DPYSL3Q14195 570 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 ZNF235Q14590 738 aa20.09■□□□□ 0.81
CMTM3-207ENST00000564060 LBRQ14739 615 aaKnown RBP20.09■□□□□ 0.81
CMTM3-207ENST00000564060 SEL1L3Q68CR1 1132 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms