RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 RNGTTO60942 597 aaKnown RBP20.55■□□□□ 0.88
CMTM3-206ENST00000563672 IPO7O95373 1038 aaKnown RBP20.55■□□□□ 0.88
CMTM3-206ENST00000563672 NUDT1P36639 197 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 MAPK8P45983 427 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 RGRP47804 291 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 GRIA4P48058 902 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 CSNK1EP49674 416 aaKnown RBP20.55■□□□□ 0.88
CMTM3-206ENST00000563672 NSUN2Q08J23 767 aaKnown RBP eCLIP20.55■□□□□ 0.88
CMTM3-206ENST00000563672 SLC10A7Q0GE19 358 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 GRIK2Q13002 908 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 LBRQ14739 615 aaKnown RBP20.55■□□□□ 0.88
CMTM3-206ENST00000563672 TMCO4Q5TGY1 634 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 RHOT1Q8IXI2 618 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 RNF157Q96PX1 679 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 PSKH2Q96QS6 385 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 GTPBP2Q9BX10 602 aaKnown RBP20.55■□□□□ 0.88
CMTM3-206ENST00000563672 DKK3Q9UBP4 350 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 SALL4Q9UJQ4 1053 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 FADS3Q9Y5Q0 445 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 CACNA1AO00555 2505 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 LRRD1A4D1F6 860 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 MUSKO15146 869 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 AP1G1O43747 822 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 MFSD11O43934 449 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 GRM3Q14832 879 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 ZFYVE27Q5T4F4 411 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 SRLQ86TD4 932 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 PRPF39Q86UA1 669 aaKnown RBP20.54■□□□□ 0.88
CMTM3-206ENST00000563672 HORMAD1Q86X24 394 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 MINDY1Q8N5J2 469 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 ATPAF2Q8N5M1 289 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 RAB7BQ96AH8 199 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 SLC6A18Q96N87 628 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 CINPQ9BW66 212 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-206ENST00000563672 SEPT3Q9UH03 358 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 ZFR2Q9UPR6 939 aaKnown RBP20.54■□□□□ 0.88
CMTM3-206ENST00000563672 DMTF1Q9Y222 760 aa20.54■□□□□ 0.88
CMTM3-206ENST00000563672 KNL1Q8NG31 2342 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 A0A1B0GVT2 93 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 A0A1W2PQU0 124 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 DCDC2BA2VCK2 349 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 BTNL10A8MVZ5 291 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 WNT9AO14904 365 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 PJA2O43164 708 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 SPOPO43791 374 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 MAT2AP31153 395 aaKnown RBP20.53■□□□□ 0.88
CMTM3-206ENST00000563672 ABL2P42684 1182 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 RENBPP51606 427 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 ATXN3P54252 364 aaPredicted RBP20.53■□□□□ 0.88
CMTM3-206ENST00000563672 GALNT2Q10471 571 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 TEAD4Q15561 434 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 C11orf63Q6NUN7 778 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 ACRBPQ8NEB7 543 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 OR2I1PQ8NGU4 316 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 TPCN2Q8NHX9 752 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 HCAR2Q8TDS4 363 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 SERAC1Q96JX3 654 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 CALR3Q96L12 384 aaKnown RBP20.53■□□□□ 0.88
CMTM3-206ENST00000563672 TUBGCP5Q96RT8 1024 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 LACRTQ9GZZ8 138 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 GOLPH3Q9H4A6 298 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 DNAAF2Q9NVR5 837 aaKnown RBP20.53■□□□□ 0.88
CMTM3-206ENST00000563672 DDX56Q9NY93 547 aaKnown RBP20.53■□□□□ 0.88
CMTM3-206ENST00000563672 DUSP10Q9Y6W6 482 aa20.53■□□□□ 0.88
CMTM3-206ENST00000563672 A0A1W2PR77 199 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 VILLO15195 856 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 SPINT1O43278 529 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 PSTPIP1O43586 416 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 GJB3O75712 270 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 PCDH8O95206 1070 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 PIGNO95427 931 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 WNT1P04628 370 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 TIMP2P16035 220 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 GARSP41250 739 aaKnown RBP20.52■□□□□ 0.88
CMTM3-206ENST00000563672 VAV2P52735 878 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 GBE1Q04446 702 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 SLC10A2Q12908 348 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-206ENST00000563672 KIF19Q2TAC6 998 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 ZNF284Q2VY69 593 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 TMEM259Q4ZIN3 620 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 SETMARQ53H47 684 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-206ENST00000563672 NAPEPLDQ6IQ20 393 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 IL27RAQ6UWB1 636 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 NSMCE3Q96MG7 304 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 ZNF641Q96N77 438 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-206ENST00000563672 TSGA13Q96PP4 275 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 SUV39H2Q9H5I1 410 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 ANKRD6Q9Y2G4 727 aa20.52■□□□□ 0.88
CMTM3-206ENST00000563672 TSPAN11A1L157 253 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 GOLGA6L6A8MZA4 724 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 AREL1O15033 823 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 TSPAN6O43657 245 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 KRT1P04264 644 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 TNNT1P13805 278 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 HSPA9P38646 679 aaKnown RBP20.51■□□□□ 0.87
CMTM3-206ENST00000563672 SEL1L3Q68CR1 1132 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 SLC9A4Q6AI14 798 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 LAYNQ6UX15 382 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 TTC7BQ86TV6 843 aa20.51■□□□□ 0.87
CMTM3-206ENST00000563672 TEX26Q8N6G2 289 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms