RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 TMCC1O94876 653 aa21.32■■□□□ 1
GGA2-205ENST00000563494 CYTH1Q15438 398 aa21.32■■□□□ 1
GGA2-205ENST00000563494 CCDC157Q569K6 752 aa21.32■■□□□ 1
GGA2-205ENST00000563494 ATXN7L2Q5T6C5 722 aaPredicted RBP21.32■■□□□ 1
GGA2-205ENST00000563494 DCP2Q8IU60 420 aaKnown RBP21.32■■□□□ 1
GGA2-205ENST00000563494 CASKIN2Q8WXE0 1202 aa21.32■■□□□ 1
GGA2-205ENST00000563494 HMCESQ96FZ2 354 aa21.32■■□□□ 1
GGA2-205ENST00000563494 PDFQ9HBH1 243 aa21.32■■□□□ 1
GGA2-205ENST00000563494 AIPL1Q9NZN9 384 aa21.32■■□□□ 1
GGA2-205ENST00000563494 HPCAL4Q9UM19 191 aa21.32■■□□□ 1
GGA2-205ENST00000563494 ITM2BQ9Y287 266 aa21.32■■□□□ 1
GGA2-205ENST00000563494 RAXQ9Y2V3 346 aa21.32■■□□□ 1
GGA2-205ENST00000563494 URB1O60287 2271 aaKnown RBP21.31■■□□□ 1
GGA2-205ENST00000563494 IGLON5A6NGN9 336 aa21.31■■□□□ 1
GGA2-205ENST00000563494 A6NNZ2 444 aa21.31■■□□□ 1
GGA2-205ENST00000563494 RASA4BC9J798 803 aa21.31■■□□□ 1
GGA2-205ENST00000563494 GOLGA6L22H0YM25 854 aa21.31■■□□□ 1
GGA2-205ENST00000563494 RASA4O43374 803 aa21.31■■□□□ 1
GGA2-205ENST00000563494 PFN3P60673 137 aa21.31■■□□□ 1
GGA2-205ENST00000563494 EFHC2Q5JST6 749 aa21.31■■□□□ 1
GGA2-205ENST00000563494 SCYL2Q6P3W7 929 aa21.31■■□□□ 1
GGA2-205ENST00000563494 KDM7AQ6ZMT4 941 aa21.31■■□□□ 1
GGA2-205ENST00000563494 NETO2Q8NC67 525 aa21.31■■□□□ 1
GGA2-205ENST00000563494 KLHL32Q96NJ5 620 aa21.31■■□□□ 1
GGA2-205ENST00000563494 NAP1L5Q96NT1 182 aaPredicted RBP21.31■■□□□ 1
GGA2-205ENST00000563494 CALN1Q9BXU9 219 aa21.31■■□□□ 1
GGA2-205ENST00000563494 OSBPL1AQ9BXW6 950 aa21.31■■□□□ 1
GGA2-205ENST00000563494 CPEB1Q9BZB8 566 aaKnown RBP21.31■■□□□ 1
GGA2-205ENST00000563494 LHX3Q9UBR4 397 aa21.31■■□□□ 1
GGA2-205ENST00000563494 PNMA8BQ9ULN7 279 aaPredicted RBP21.31■■□□□ 1
GGA2-205ENST00000563494 COL27A1Q8IZC6 1860 aaPredicted RBP21.3■■□□□ 1
GGA2-205ENST00000563494 TMEM191CA6NGB0 347 aa21.3■■□□□ 1
GGA2-205ENST00000563494 LRRC53A6NM62 1247 aa21.3■■□□□ 1
GGA2-205ENST00000563494 KRIT1O00522 736 aa21.3■■□□□ 1
GGA2-205ENST00000563494 BUB1O43683 1085 aa21.3■■□□□ 1
GGA2-205ENST00000563494 CSF2P04141 144 aa21.3■■□□□ 1
GGA2-205ENST00000563494 UGT2B4P06133 528 aa21.3■■□□□ 1
GGA2-205ENST00000563494 PRKCIP41743 596 aa21.3■■□□□ 1
GGA2-205ENST00000563494 INSM1Q01101 510 aaPredicted RBP21.3■■□□□ 1
GGA2-205ENST00000563494 TARDBPQ13148 414 aaKnown RBP eCLIP21.3■■□□□ 1
GGA2-205ENST00000563494 MAPK8IP2Q13387 824 aaPredicted RBP21.3■■□□□ 1
GGA2-205ENST00000563494 RTP5Q14D33 572 aa21.3■■□□□ 1
GGA2-205ENST00000563494 IQCB1Q15051 598 aa21.3■■□□□ 1
GGA2-205ENST00000563494 CA9Q16790 459 aa21.3■■□□□ 1
GGA2-205ENST00000563494 PARP15Q460N3 678 aa21.3■■□□□ 1
GGA2-205ENST00000563494 HES3Q5TGS1 186 aa21.3■■□□□ 1
GGA2-205ENST00000563494 GDPD4Q6W3E5 623 aa21.3■■□□□ 1
GGA2-205ENST00000563494 ZNF571Q7Z3V5 609 aaPredicted RBP21.3■■□□□ 1
GGA2-205ENST00000563494 DNAAF5Q86Y56 855 aa21.3■■□□□ 1
GGA2-205ENST00000563494 FAM181AQ8N9Y4 354 aa21.3■■□□□ 1
GGA2-205ENST00000563494 PEBP4Q96S96 227 aa21.3■■□□□ 1
GGA2-205ENST00000563494 TRIM7Q9C029 511 aa21.3■■□□□ 1
GGA2-205ENST00000563494 SCUBE2Q9NQ36 999 aa21.3■■□□□ 1
GGA2-205ENST00000563494 SEPT11Q9NVA2 429 aaKnown RBP21.3■■□□□ 1
GGA2-205ENST00000563494 DKK3Q9UBP4 350 aa21.3■■□□□ 1
GGA2-205ENST00000563494 LHX6Q9UPM6 363 aa21.3■■□□□ 1
GGA2-205ENST00000563494 LRRK1Q38SD2 2015 aa21.29■■□□□ 1
GGA2-205ENST00000563494 A0A087WV48 116 aa21.29■■□□□ 1
GGA2-205ENST00000563494 A0A1B0GTH6 734 aa21.29■■□□□ 1
GGA2-205ENST00000563494 A0A1W2PQC6 194 aa21.29■■□□□ 1
GGA2-205ENST00000563494 INSIG1O15503 277 aa21.29■■□□□ 1
GGA2-205ENST00000563494 CREB3O43889 395 aa21.29■■□□□ 1
GGA2-205ENST00000563494 CCDC172P0C7W6 258 aa21.29■■□□□ 1
GGA2-205ENST00000563494 GZMAP12544 262 aa21.29■■□□□ 1
GGA2-205ENST00000563494 HOXB3P14651 431 aaPredicted RBP21.29■■□□□ 1
GGA2-205ENST00000563494 NME1P15531 152 aaKnown RBP21.29■■□□□ 1
GGA2-205ENST00000563494 TIMP2P16035 220 aa21.29■■□□□ 1
GGA2-205ENST00000563494 ITIH2P19823 946 aa21.29■■□□□ 1
GGA2-205ENST00000563494 HTR7P34969 479 aa21.29■■□□□ 1
GGA2-205ENST00000563494 AFMIDQ63HM1 303 aa21.29■■□□□ 1
GGA2-205ENST00000563494 TMC6Q7Z403 805 aa21.29■■□□□ 1
GGA2-205ENST00000563494 DENND6BQ8NEG7 585 aa21.29■■□□□ 1
GGA2-205ENST00000563494 EPAS1Q99814 870 aa21.29■■□□□ 1
GGA2-205ENST00000563494 HAUS4Q9H6D7 363 aa21.29■■□□□ 1
GGA2-205ENST00000563494 CACNA1GO43497 2377 aa21.29■■□□□ 1
GGA2-205ENST00000563494 SMG1Q96Q15 3661 aaKnown RBP21.28■■□□□ 1
GGA2-205ENST00000563494 IGSF10Q6WRI0 2623 aa21.28■■□□□ 1
GGA2-205ENST00000563494 TSPAN11A1L157 253 aa21.28■■□□□ 1
GGA2-205ENST00000563494 DDX3XO00571 662 aaKnown RBP eCLIP21.28■■□□□ 11e-20■■■■□ 23.2
GGA2-205ENST00000563494 SCAMP1O15126 338 aa21.28■■□□□ 1
GGA2-205ENST00000563494 CKMT1AP12532 417 aa21.28■■□□□ 1
GGA2-205ENST00000563494 JUPP14923 745 aa21.28■■□□□ 1
GGA2-205ENST00000563494 TNFAIP3P21580 790 aa21.28■■□□□ 1
GGA2-205ENST00000563494 RABIFP47224 123 aa21.28■■□□□ 1
GGA2-205ENST00000563494 EIF2B5Q13144 721 aaKnown RBP21.28■■□□□ 1
GGA2-205ENST00000563494 NR1I3Q14994 352 aa21.28■■□□□ 1
GGA2-205ENST00000563494 ZNF542PQ5EBM4 170 aa21.28■■□□□ 1
GGA2-205ENST00000563494 DCBLD1Q8N8Z6 715 aa21.28■■□□□ 1
GGA2-205ENST00000563494 HCAR2Q8TDS4 363 aa21.28■■□□□ 1
GGA2-205ENST00000563494 FNIP1Q8TF40 1166 aa21.28■■□□□ 1
GGA2-205ENST00000563494 GDAP1L1Q96MZ0 367 aa21.28■■□□□ 1
GGA2-205ENST00000563494 CATSPERBQ9H7T0 1116 aa21.28■■□□□ 1
GGA2-205ENST00000563494 PARVAQ9NVD7 372 aa21.28■■□□□ 1
GGA2-205ENST00000563494 NLGN3Q9NZ94 848 aa21.28■■□□□ 1
GGA2-205ENST00000563494 J3KR12 359 aa21.27■■□□□ 1
GGA2-205ENST00000563494 FGF10O15520 208 aaPredicted RBP21.27■■□□□ 1
GGA2-205ENST00000563494 NDST2P52849 883 aa21.27■■□□□ 1
GGA2-205ENST00000563494 CDCP2Q5VXM1 449 aa21.27■■□□□ 1
GGA2-205ENST00000563494 DCUN1D2Q6PH85 259 aa21.27■■□□□ 1
GGA2-205ENST00000563494 C19orf48Q6RUI8 117 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms