RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PLEKHA6Q9Y2H5 1048 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ARAP3Q8WWN8 1544 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ASTN2O75129 1339 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 IFRD1O00458 451 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 PLOD2O00469 737 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RORCP51449 518 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 TTLL12Q14166 644 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 TLR1Q15399 786 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ANO4Q32M45 955 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 EFHC2Q5JST6 749 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 AMIGO1Q86WK6 493 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 IL17REQ8NFR9 667 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 AURKBQ96GD4 344 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 REEP1Q9H902 201 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 METP08581 1390 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 PSIP1O75475 530 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 BCAS2O75934 225 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 KLF10Q13118 480 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 BRMS1LQ5PSV4 323 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 FBXO31Q5XUX0 539 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 OR6B2Q6IFH4 312 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 NEPROQ6NW34 567 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 NOXA1Q86UR1 476 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CYP4Z1Q86W10 505 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 FBXO11Q86XK2 927 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 MEIOBQ8N635 442 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RNF148Q8N7C7 305 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 EPS8L1Q8TE68 723 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 PTCD2Q8WV60 388 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 SLC9A6Q92581 669 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 DIRAS2Q96HU8 199 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SAV1Q9H4B6 383 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 UCKL1Q9NWZ5 548 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 BTN3A1O00481 513 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 PRMT5O14744 637 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 CYP11B1P15538 503 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ITKQ08881 620 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 NFATC3Q12968 1075 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SIGIRRQ6IA17 410 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ANKS1BQ7Z6G8 1248 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CLYBLQ8N0X4 340 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 THEMISQ8N1K5 641 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 GPD1LQ8N335 351 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 MCPH1Q8NEM0 835 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 TXNDC15Q96J42 360 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 DUSP9Q99956 384 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 ARMC7Q9H6L4 198 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 NMRAL1Q9HBL8 299 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ADPRHL2Q9NX46 363 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 LEF1Q9UJU2 399 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 SNX8Q9Y5X2 465 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 DEPDC5O75140 1603 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 C5orf58C9J3I9 102 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ANGPTL1O95841 491 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 HADHBP55084 474 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 SSTP61278 116 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SLC18A2Q05940 514 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 GNASQ5JWF2 1037 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SCML4Q8N228 414 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 TCTEX1D2Q8WW35 142 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ASB15Q8WXK1 588 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 KAT2AQ92830 837 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 MIPEPQ99797 713 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 LPIN3Q9BQK8 851 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SPATA9Q9BWV2 254 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 DHX35Q9H5Z1 703 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 STAP1Q9ULZ2 295 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RASGRP1O95267 797 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CYP1A2P05177 515 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 AP2S1P53680 142 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 CDH4P55283 916 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 DEFA6Q01524 100 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CDH18Q13634 790 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ESCO2Q56NI9 601 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SLFN11Q7Z7L1 901 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RELL1Q8IUW5 271 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SLC39A13Q96H72 371 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ZSWIM3Q96MP5 696 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SSX3Q99909 188 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 DCSTAMPQ9H295 470 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 EXD2Q9NVH0 621 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 NXF1Q9UBU9 619 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 IKZF3Q9UKT9 509 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 A0A087X1B8 175 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 KRBOX1C9JBD0 128 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 FSCN2O14926 492 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CNPP09543 421 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 CD72P21854 359 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ADORA1P30542 326 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SSTR1P30872 391 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 PRMT2P55345 433 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RPS7P62081 194 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 SEMA3AQ14563 771 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RFTN1Q14699 578 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 LRRC24Q50LG9 513 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 AFTPHQ6ULP2 937 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CATSPER4Q7RTX7 472 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 OR10T2Q8NGX3 314 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms