RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ABCC4O15439 1325 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 PTPRCP08575 1304 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 TRBV5-3A0A0A0MS03 114 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 KIR2DS5A0A0G2JLQ3 304 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 FAM90A18PA6NE21 464 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 FAM90A16PA6NEW6 464 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 FAM90A9PA6NNJ1 464 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 FAM90A5PA8MXJ8 464 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 KIR2DS3K7RE56 304 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 ACKR2O00590 384 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 TRIM38O00635 465 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 TLX3O43711 291 aaPredicted RBP5.34□□□□□ -1.55
LINC00254-201ENST00000563416 ZC3H11AO75152 810 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00254-201ENST00000563416 NFATC1O95644 943 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 FAM90A15PP0C7V4 464 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 FAM90A14PP0C7W9 464 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 SCP2P22307 547 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 ALDH1B1P30837 517 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 CIITAP33076 1130 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 DDIT3P35638 169 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 ALDH7A1P49419 539 aaKnown RBP5.34□□□□□ -1.55
LINC00254-201ENST00000563416 PRELPP51888 382 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 SHC2P98077 582 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 NEXNQ0ZGT2 675 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 TRIM14Q14142 442 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 MANEAQ5SRI9 462 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 CYB5R4Q7L1T6 521 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
LINC00254-201ENST00000563416 LINS1Q8NG48 757 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 IGFBPL1Q8WX77 278 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 ZNF347Q96SE7 839 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 PIMREGQ9BSJ6 248 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 DECR2Q9NUI1 292 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 NDUFAF4Q9P032 175 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 BAG5Q9UL15 447 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 TNFSF13BQ9Y275 285 aa5.34□□□□□ -1.55
LINC00254-201ENST00000563416 HSD3B1P14060 373 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 FAM3BP58499 235 aaPredicted RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 IRX6P78412 446 aaPredicted RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 FOXO1Q12778 655 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 GCKRQ14397 625 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 PGM5Q15124 567 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 MIDNQ504T8 468 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 C10orf76Q5T2E6 689 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 BEND3Q5T5X7 828 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 MMP21Q8N119 569 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 C3orf49Q96BT1 292 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 RBM17Q96I25 401 aaKnown RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 TBATAQ96M53 351 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 SORBS1Q9BX66 1292 aaKnown RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 OSBPL5Q9H0X9 879 aaPredicted RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 TAOK3Q9H2K8 898 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 PABPC3Q9H361 631 aaKnown RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 SEMA4BQ9NPR2 832 aaPredicted RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 THSD1Q9NS62 852 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 TMLHEQ9NVH6 421 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 DAPP1Q9UN19 280 aa5.33□□□□□ -1.56
LINC00254-201ENST00000563416 COPG1Q9Y678 874 aaKnown RBP5.33□□□□□ -1.56
LINC00254-201ENST00000563416 MYO5AQ9Y4I1 1855 aaKnown RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 UTYO14607 1347 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 KIF16BQ96L93 1317 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 H3BNX3 289 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 RHODO00212 210 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 BBOX1O75936 387 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 SYF2O95926 243 aaKnown RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 PEPDP12955 493 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 SERPINA4P29622 427 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 RCAN1P53805 252 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 POLGP54098 1239 aaPredicted RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 RARSP54136 660 aaKnown RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 GRAPQ13588 217 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 ZNF260Q3ZCT1 412 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 TTC22Q5TAA0 569 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 OLFM4Q6UX06 510 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 COLCA1Q6ZS62 124 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 TRAPPC11Q7Z392 1133 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 IRF2BP2Q7Z5L9 587 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 DDIASQ8IXT1 998 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 CACNA2D3Q8IZS8 1091 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 ZNF366Q8N895 744 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 ENDOVQ8N8Q3 282 aaKnown RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 OR1N1Q8NGS0 311 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 GRAPLQ8TC17 118 aaPredicted RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 CENPIQ92674 756 aaPredicted RBP5.32□□□□□ -1.56
LINC00254-201ENST00000563416 VCPIP1Q96JH7 1222 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 NLRP4Q96MN2 994 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 MYLK2Q9H1R3 596 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 MSRB1Q9NZV6 116 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 UTS2RQ9UKP6 389 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 LAMP3Q9UQV4 416 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 ATP6V0A2Q9Y487 856 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 SQORQ9Y6N5 450 aa5.32□□□□□ -1.56
LINC00254-201ENST00000563416 MYH7P12883 1935 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 AKAP11Q9UKA4 1901 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 MCIDASD6RGH6 385 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms