RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 K7ERQ8 282 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 FANCGO15287 622 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 SLC31A1O15431 190 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 FFAR2O15552 330 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 SLC7A4O43246 635 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 SMAD6O43541 496 aaKnown RBP13.63□□□□□ -0.23
SPG7-207ENST00000563218 SRCP12931 536 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 SNX16P57768 344 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 C19orf57Q0VDD7 668 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 NME3Q13232 169 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 TUBB2AQ13885 445 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 PTPN20Q4JDL3 420 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 ALFQ53S48 1182 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 C2CD6Q53TS8 623 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 RABGAP1LQ5R372 815 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 LRRC69Q6ZNQ3 347 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 PHLDB2Q86SQ0 1253 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 DAAM2Q86T65 1068 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 SLC22A18ASQ8N1D0 253 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 TMEM145Q8NBT3 493 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 CHST14Q8NCH0 376 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 OR13H1Q8NG92 308 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 RNF34Q969K3 372 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 C18orf8Q96DM3 657 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 TUBB2BQ9BVA1 445 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 TMPRSS4Q9NRS4 437 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 PARVAQ9NVD7 372 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 ZFR2Q9UPR6 939 aaKnown RBP13.63□□□□□ -0.23
SPG7-207ENST00000563218 CLCA2Q9UQC9 943 aa13.63□□□□□ -0.23
SPG7-207ENST00000563218 A0A1W2PQU0 124 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 C1QTNF3-AMACRE9PGA6 284 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 PRAMEF26H0Y7S4 382 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 MCF2LO15068 1137 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 ATXN7O15265 892 aaPredicted RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 BUB1BO60566 1050 aaPredicted RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 PAGE1O75459 146 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 FTCDO95954 541 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 ERBB2P04626 1255 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 ATP1A1P05023 1023 aaKnown RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 THEGLP0DJG4 465 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 DGKAP23743 735 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 CCR1P32246 355 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 CLDN2P57739 230 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 STAT4Q14765 748 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 ZNF284Q2VY69 593 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 SETMARQ53H47 684 aaPredicted RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 TTC39BQ5VTQ0 682 aaPredicted RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 PLEKHA7Q6IQ23 1121 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 C11orf63Q6NUN7 778 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 DNAJC24Q6P3W2 148 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 LINGO4Q6UY18 593 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 GCNT7Q6ZNI0 430 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 IQCHQ86VS3 1027 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 DCBLD1Q8N8Z6 715 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 LRRC57Q8N9N7 239 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 KLHDC7BQ96G42 594 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 NAF1Q96HR8 494 aaKnown RBP13.62□□□□□ -0.23
SPG7-207ENST00000563218 TRIM62Q9BVG3 475 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 SIK2Q9H0K1 926 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 ANAPC7Q9UJX3 599 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 AMFRQ9UKV5 643 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 DMTF1Q9Y222 760 aa13.62□□□□□ -0.23
SPG7-207ENST00000563218 LY6G6EA0A0G2JKS1 128 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 TMEM110-MUSTN1A8MSY1 372 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
SPG7-207ENST00000563218 DAB1O75553 588 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 MT-CO3P00414 261 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 CDK4P11802 303 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 GABRB2P47870 512 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 GSCP56915 257 aaPredicted RBP13.61□□□□□ -0.23
SPG7-207ENST00000563218 TLE3Q04726 772 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 ILKQ13418 452 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 MAMLD1Q13495 774 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 MESDQ14696 234 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 TBC1D25Q3MII6 688 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 ZNF542PQ5EBM4 170 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 ARTNQ5T4W7 220 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 MEI1Q5TIA1 1274 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 FAM46CQ5VWP2 391 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 PAPD7Q5XG87 772 aaKnown RBP13.61□□□□□ -0.23
SPG7-207ENST00000563218 SEL1L3Q68CR1 1132 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 OR6B2Q6IFH4 312 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 OLFML1Q6UWY5 402 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 PEX26Q7Z412 305 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 SLFN11Q7Z7L1 901 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 DSG4Q86SJ6 1040 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 SPACA3Q8IXA5 215 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 C3orf20Q8ND61 904 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 OR2A12Q8NGT7 310 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 OR4C6Q8NH72 309 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 GRIN3AQ8TCU5 1115 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 SELENOOQ9BVL4 669 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 CALN1Q9BXU9 219 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 MUC3BQ9H195 1237 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 TNKS2Q9H2K2 1166 aa13.61□□□□□ -0.23
SPG7-207ENST00000563218 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms