RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 AVPR1AP37288 418 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 CCR10P46092 362 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 SLC12A2P55011 1212 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 MS4A2Q01362 244 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 MAP7Q14244 749 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 USP41Q3LFD5 358 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 TSTD2Q5T7W7 516 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 ANKRD23Q86SG2 305 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 ALDH16A1Q8IZ83 802 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 PELI3Q8N2H9 469 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 ATPAF2Q8N5M1 289 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 BHLHE22Q8NFJ8 381 aaPredicted RBP13.23□□□□□ -0.29
USB1-207ENST00000563149 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 CALML6Q8TD86 181 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 RNF34Q969K3 372 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 ASB9Q96DX5 294 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 PRICKLE1Q96MT3 831 aaPredicted RBP13.23□□□□□ -0.29
USB1-207ENST00000563149 TREX1Q9NSU2 369 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 SUCOQ9UBS9 1254 aaKnown RBP13.23□□□□□ -0.29
USB1-207ENST00000563149 SARDHQ9UL12 918 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 G3BP2Q9UN86 482 aaKnown RBP13.23□□□□□ -0.29
USB1-207ENST00000563149 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 TREHO43280 583 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 IGLV3-25P01717 112 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 THP07101 528 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 TRAP1Q12931 704 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 EIF4EBP2Q13542 120 aaPredicted RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 SQLEQ14534 574 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PPP2R5DQ14738 602 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PDCD2Q16342 344 aaPredicted RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 FAM83EQ2M2I3 478 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 IRAK1BP1Q5VVH5 260 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 ESRP1Q6NXG1 681 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 TAC4Q86UU9 113 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 CEP97Q8IW35 865 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 DENND6AQ8IWF6 608 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 CCNYL1Q8N7R7 359 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 USP33Q8TEY7 942 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 EDEM1Q92611 657 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 DUS3LQ96G46 650 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 ELMO2Q96JJ3 720 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PPP1R36Q96LQ0 422 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 FICDQ9BVA6 458 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 KATNAL1Q9BW62 490 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 COPS7BQ9H9Q2 264 aaPredicted RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 SNX10Q9Y5X0 201 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 BTBD19C9JJ37 291 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 DFFAO00273 331 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 MAFKO60675 156 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 CLPTM1O96005 669 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PENKP01210 267 aaPredicted RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 RBP1P09455 135 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 CD1EP15812 388 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 DPP6P42658 865 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PKNOX1P55347 436 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 TAS2R39P59534 338 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 MPP1Q00013 466 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PFKPQ01813 784 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 CTBP1Q13363 440 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PTK2BQ14289 1009 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 POU6F1Q14863 301 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 TMEM198Q66K66 360 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 TRIM67Q6ZTA4 783 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 GALNT7Q86SF2 657 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 SLC22A9Q8IVM8 553 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 TMEM102Q8N9M5 508 aaPredicted RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 IPMKQ8NFU5 416 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 USP13Q92995 863 aaPredicted RBP13.22□□□□□ -0.29
USB1-207ENST00000563149 MOCOSQ96EN8 888 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 TSPAN17Q96FV3 270 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 FTHL17Q9BXU8 183 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 UNC93B1Q9H1C4 597 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 POMKQ9H5K3 350 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 MEAF6Q9HAF1 191 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 FNIP2Q9P278 1114 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 PACSIN3Q9UKS6 424 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 FBXO5Q9UKT4 447 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 NEU3Q9UQ49 428 aa13.22□□□□□ -0.29
USB1-207ENST00000563149 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 TFAP2AP05549 437 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 C8BP07358 591 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 PAX3P23760 479 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 ARNTP27540 789 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 SLC1A2P43004 574 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 CPT1AP50416 773 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 ATP4BP51164 291 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 CLCN5P51795 746 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms