RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 GOLGA6L6A8MZA4 724 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 PRAMEF11O60813 436 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 LEFTY1O75610 366 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
CDT1-202ENST00000562747 IL4RP24394 825 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 SERPINB6P35237 376 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 GJC1P36383 396 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 SLC1A1P43005 524 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 METAP1P53582 386 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 ADPRHP54922 357 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 DPYSL3Q14195 570 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 COL28A1Q2UY09 1125 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 ARSIQ5FYB1 569 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.82■□□□□ 0.28
CDT1-202ENST00000562747 LEKR1Q6ZMV7 388 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 MAP7D3Q8IWC1 876 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 KCTD6Q8NC69 237 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 GRIN3AQ8TCU5 1115 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 PPP1R16AQ96I34 528 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 LRIG1Q96JA1 1093 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 ZNF670Q9BS34 389 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 TM6SF2Q9BZW4 377 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 DYRK4Q9NR20 520 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 HECAQ9UBI9 543 aaPredicted RBP16.82■□□□□ 0.28
CDT1-202ENST00000562747 UBA2Q9UBT2 640 aaPredicted RBP16.82■□□□□ 0.28
CDT1-202ENST00000562747 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.82■□□□□ 0.28
CDT1-202ENST00000562747 WASF2Q9Y6W5 498 aa16.82■□□□□ 0.28
CDT1-202ENST00000562747 C10orf142B7Z368 130 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 J3KR12 359 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 DFFAO00273 331 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 KPNA3O00505 521 aaPredicted RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 BCAT2O15382 392 aaPredicted RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 PLRG1O43660 514 aaKnown RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 CD48P09326 243 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 IL10RBQ08334 325 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 CNTN1Q12860 1018 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 HLA-BQ31612 363 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 ATP13A4Q4VNC1 1196 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 AGBL4Q5VU57 503 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 KIAA0895LQ68EN5 471 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 NCEH1Q6PIU2 408 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 OR14C36Q8NHC7 312 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 SETD7Q8WTS6 366 aaKnown RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 BIRC7Q96CA5 298 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 GDAP1L1Q96MZ0 367 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 HDAC8Q9BY41 377 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 CCDC86Q9H6F5 360 aaKnown RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 SP110Q9HB58 689 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 ETNK2Q9NVF9 386 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 APOBEC2Q9Y235 224 aaKnown RBP16.81■□□□□ 0.28
CDT1-202ENST00000562747 BTBD3Q9Y2F9 522 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 APC2O95996 2303 aa16.81■□□□□ 0.28
CDT1-202ENST00000562747 A0A1B0GVT2 93 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 FAM47DPA6NHR8 397 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 DKK1O94907 266 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 FSBPO95073 299 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 POP4O95707 220 aaKnown RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 CER1O95813 267 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 IGSF6O95976 241 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 ATXN1LP0C7T5 689 aaKnown RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 ZNF883P0CG24 379 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 ITGB7P26010 798 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 CCR5P51681 352 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 RHOAP61586 193 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 RAD51Q06609 339 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 MMRN1Q13201 1228 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 RFTN1Q14699 578 aaPredicted RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 CYTH1Q15438 398 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 MYLK3Q32MK0 819 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 POM121L1PQ3SYA9 428 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 SOWAHCQ53LP3 525 aaPredicted RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 PDZD3Q86UT5 571 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 RYBPQ8N488 228 aaPredicted RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 SNX19Q92543 992 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 ARRDC3Q96B67 414 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 FAF2Q96CS3 445 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 CALR3Q96L12 384 aaKnown RBP16.8■□□□□ 0.28
CDT1-202ENST00000562747 CALN1Q9BXU9 219 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 OSBPL1AQ9BXW6 950 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 ZDHHC6Q9H6R6 413 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 RAXQ9Y2V3 346 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 MFHAS1Q9Y4C4 1052 aa16.8■□□□□ 0.28
CDT1-202ENST00000562747 ZNF487B1APH4 448 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 PLK4O00444 970 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 IGHV4-34P06331 123 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 CD27P26842 260 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 CSNK1EP49674 416 aaKnown RBP16.79■□□□□ 0.28
CDT1-202ENST00000562747 ANKRD20A8PQ5CZ79 823 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 ZFYVE27Q5T4F4 411 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 ATXN7L2Q5T6C5 722 aaPredicted RBP16.79■□□□□ 0.28
CDT1-202ENST00000562747 PIP5KL1Q5T9C9 394 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 RAD9BQ6WBX8 426 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 DBX2Q6ZNG2 339 aa16.79■□□□□ 0.28
CDT1-202ENST00000562747 ERN2Q76MJ5 926 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms