RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF781Q8N8C0 355 aa14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 PPTC7Q8NI37 304 aa14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 RP9Q8TA86 221 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 FAF2Q96CS3 445 aa14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 WDR55Q9H6Y2 383 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 TBC1D14Q9P2M4 693 aa14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 ANK1P16157 1881 aa14.19□□□□□ -0.14
GTF3C1-203ENST00000562609 KMOO15229 486 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 VAPBO95292 243 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 RALBP11234 206 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 EEF1DP29692 281 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 GTF2A2P52657 109 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 SLC10A6Q3KNW5 377 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 MARCH8Q5T0T0 291 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 HMBOX1Q6NT76 420 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 TTC23LQ6PF05 361 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 TAS2R42Q7RTR8 314 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 ANKRD13BQ86YJ7 626 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 ABHD11Q8NFV4 315 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 SH3YL1Q96HL8 342 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 HOXD1Q9GZZ0 328 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 POPDC2Q9HBU9 364 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 GBA2Q9HCG7 927 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 PRMT7Q9NVM4 692 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 PLXNB2O15031 1838 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 B4GALT4O60513 344 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 TGM1P22735 817 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 GLDCP23378 1020 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 BMPR1AP36894 532 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 AP3M2P53677 418 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 IFITM3Q01628 133 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 PTK2BQ14289 1009 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 ZNF667Q5HYK9 610 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 ZNF484Q5JVG2 852 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 SIGIRRQ6IA17 410 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 TTC39CQ8N584 583 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 EMC1Q8N766 993 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 SLCO4A1Q96BD0 722 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 ZNF486Q96H40 463 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 SNX25Q9H3E2 840 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 PCDHGA11Q9Y5H2 935 aa14.18□□□□□ -0.14
GTF3C1-203ENST00000562609 TMEM191CA6NGB0 347 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 TRIM64A6NGJ6 449 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 SAC3D1A6NKF1 404 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 TRDMT1O14717 391 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 MYF6P23409 242 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 HARS2P49590 506 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 RAD23AP54725 363 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 GRSF1Q12849 480 aaKnown RBP eCLIP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 BFSP2Q13515 415 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 GRIK4Q16099 956 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 KCNT1Q5JUK3 1230 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 ATAD3BQ5T9A4 648 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 DNAJC24Q6P3W2 148 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 OR6J1Q8NGC5 347 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 SUN5Q8TC36 379 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 TINF2Q9BSI4 451 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 GDAP2Q9NXN4 497 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 LOC105371267A0A1B0GV96 52 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 ILVBLA1L0T0 632 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 HSPA4LO95757 839 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 YAP1P46937 504 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 RHDQ02161 417 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 PRKCQQ04759 706 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 KCNJ11Q14654 390 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 PPP4R4Q6NUP7 873 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 CYP2R1Q6VVX0 501 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 HEATR4Q86WZ0 1026 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 MINDY2Q8NBR6 621 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 PDPRQ8NCN5 879 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 TMEM35BQ8NCS4 154 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 BPIFB6Q8NFQ5 453 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 ASB9Q96DX5 294 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 ADI1Q9BV57 179 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 RAD21L1Q9H4I0 556 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 NOL6Q9H6R4 1146 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 RRAGCQ9HB90 399 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 HMG20AQ9NP66 347 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 RABL2AQ9UBK7 228 aaPredicted RBP14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 CDY2AQ9Y6F7 541 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 CDY1Q9Y6F8 540 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 DGKBQ9Y6T7 804 aa14.17□□□□□ -0.14
GTF3C1-203ENST00000562609 C9IYK1 514 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 TRIM38O00635 465 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 RGS13O14921 159 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 TIPRLO75663 272 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 TMBIM6P55061 237 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 NME5P56597 212 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 OCA2Q04671 838 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 MAPRE1Q15691 268 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 CCDC58Q4VC31 144 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 GLRA4Q5JXX5 417 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 C4orf22Q6V702 233 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 UNC5AQ6ZN44 842 aa14.16□□□□□ -0.14
GTF3C1-203ENST00000562609 ILDR2Q71H61 639 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms