RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 HFEQ30201 348 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 MCMDC2Q4G0Z9 681 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 FAM98BQ52LJ0 330 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SGO1Q5FBB7 561 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 FAM76BQ5HYJ3 339 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 RARS2Q5T160 578 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ATXN7L2Q5T6C5 722 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ANKRD20A3Q5VUR7 823 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 AFMIDQ63HM1 303 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ANKRD40Q6AI12 368 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CYP4F22Q6NT55 531 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 LILRA6Q6PI73 481 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 TRAT1Q6PIZ9 186 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ATG14Q6ZNE5 492 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ARMCX2Q7L311 632 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PHLDB2Q86SQ0 1253 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CLVS1Q8IUQ0 354 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 REXO1L1PQ8IX06 675 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 KIAA2013Q8IYS2 634 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SRBD1Q8N5C6 995 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CSGALNACT2Q8N6G5 542 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PLD5Q8N7P1 536 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 RTL3Q8N8U3 475 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 LINC00301Q8NCQ3 95 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 METTL6Q8TCB7 284 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 DQX1Q8TE96 717 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CCDC12Q8WUD4 166 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SLC13A3Q8WWT9 602 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SEC14L1Q92503 715 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PRCCQ92733 491 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF274Q96GC6 653 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 GBP5Q96PP8 586 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 OR1F2PQ96R84 312 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PANX2Q96RD6 677 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CYTH2Q99418 400 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 TSC22D3Q99576 134 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 KCNJ15Q99712 375 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SLC29A1Q99808 456 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 FAM118BQ9BPY3 351 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ZFYVE21Q9BQ24 234 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PDCD2LQ9BRP1 358 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 WACQ9BTA9 647 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SLITRK6Q9H5Y7 841 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 FBRSL1Q9HCM7 1045 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CNGB3Q9NQW8 809 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SIRT3Q9NTG7 399 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 FAM105AQ9NUU6 356 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 DTLQ9NZJ0 730 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 NDUFA13Q9P0J0 144 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 KLHL14Q9P2G3 628 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 AFF4Q9UHB7 1163 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 TUBE1Q9UJT0 475 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 DBNLQ9UJU6 430 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CAPN11Q9UMQ6 739 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PCDHA7Q9UN72 937 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CORO2BQ9UQ03 480 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SLC22A14Q9Y267 594 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PPIL1Q9Y3C6 166 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 AFDNP55196 1824 aaKnown RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ECM29Q5VYK3 1845 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 COL22A1Q8NFW1 1626 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-211ENST00000562199 GLI3P10071 1580 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 MROH7-TTC4A0A0A0MT08 1334 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 FRMPD4Q14CM0 1322 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 A0A087WWV3 80 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 TRBV23-1A0A0A0MS06 115 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 FAM237AA0A1B0GTK4 181 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 LOC390937A0A1W2PQ73 354 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 TMEM120BA0PK00 339 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 TYW5A2RUC4 315 aaKnown RBP5.59□□□□□ -1.51
CAPN3-211ENST00000562199 DENND3A2RUS2 1198 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 VWA3AA6NCI4 1184 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 MFSD2BA6NFX1 497 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 FAM47DPA6NHR8 397 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 OR6C75A6NL08 312 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 TMEM210A6NLX4 147 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 NOTOA8MTQ0 251 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 DDX3XO00571 662 aaKnown RBP eCLIP5.59□□□□□ -1.51
CAPN3-211ENST00000562199 XPO1O14980 1071 aaKnown RBP5.59□□□□□ -1.51
CAPN3-211ENST00000562199 SHOXO15266 292 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 RNMTO43148 476 aaKnown RBP5.59□□□□□ -1.51
CAPN3-211ENST00000562199 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 ADAM20O43506 726 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 KCNQ3O43525 872 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 HCRTR2O43614 444 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 STX10O60499 249 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 SUPT3HO75486 399 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 CRCPO75575 148 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 CIAO1O76071 339 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 HEXIM1O94992 359 aaKnown RBP5.59□□□□□ -1.51
CAPN3-211ENST00000562199 PCDH8O95206 1070 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 THP07101 528 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 FHP07954 510 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 JMJD7P0C870 316 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 ZCCHC18P0CG32 403 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 MYBL1P10243 752 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 CHRNB1P11230 501 aa5.59□□□□□ -1.51
CAPN3-211ENST00000562199 EZRP15311 586 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms