RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CYTH1Q15438 398 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 CA9Q16790 459 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 PARP15Q460N3 678 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 ERMARDQ5T6L9 678 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 GDPD4Q6W3E5 623 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 Q6ZSR6 202 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 TTC7BQ86TV6 843 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 SLC22A18ASQ8N1D0 253 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 CASKIN2Q8WXE0 1202 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 TSC1Q92574 1164 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 RAB7BQ96AH8 199 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 KLHL32Q96NJ5 620 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 LENG8Q96PV6 779 aaPredicted RBP10.44□□□□□ -0.74
CLK3-205ENST00000561673 CALN1Q9BXU9 219 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 OSBPL1AQ9BXW6 950 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 EDEM3Q9BZQ6 932 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 LRRC19Q9H756 370 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 PCSK1NQ9UHG2 260 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 GGT7Q9UJ14 662 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 ITM2BQ9Y287 266 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 PCDHGA1Q9Y5H4 931 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 ITPR1Q14643 2758 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 SYCE3A1L190 88 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 J3KR12 359 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 TRIM38O00635 465 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 NEMP1O14524 444 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 INSIG1O15503 277 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 FGF10O15520 208 aaPredicted RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 SPINT1O43278 529 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 RFPL3O75679 317 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 C1SP09871 688 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 DGKAP23743 735 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 HTR7P34969 479 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 ACADVLP49748 655 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 CLDN6P56747 220 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 TPI1P60174 286 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 RHOAP61586 193 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 SGCGQ13326 291 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 PTAR1Q7Z6K3 402 aaPredicted RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 LUZP1Q86V48 1076 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 TMPRSS12Q86WS5 348 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 PROSER1Q86XN7 944 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 FAM174AQ8TBP5 190 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 MDM1Q8TC05 714 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 FNIP1Q8TF40 1166 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 CELF6Q96J87 481 aaKnown RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 GDAP1L1Q96MZ0 367 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 PEBP4Q96S96 227 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 KLF6Q99612 283 aaPredicted RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 DHX35Q9H5Z1 703 aaKnown RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 CCDC86Q9H6F5 360 aaKnown RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 CBX8Q9HC52 389 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 UCKL1Q9NWZ5 548 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 CNOT8Q9UFF9 292 aaKnown RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 RALYQ9UKM9 306 aaKnown RBP10.43□□□□□ -0.74
CLK3-205ENST00000561673 MFHAS1Q9Y4C4 1052 aa10.43□□□□□ -0.74
CLK3-205ENST00000561673 LOC400499M0QZD8 3231 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 TRABD2BA6NFA1 517 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 A6NNZ2 444 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 EEF2KO00418 725 aaKnown RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 AREL1O15033 823 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 SIGLEC6O43699 453 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 PIAS2O75928 621 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 RNF8O76064 485 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 IGSF6O95976 241 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 CDK4P11802 303 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 TIMP2P16035 220 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 CKMT2P17540 419 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 ITIH2P19823 946 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 MIPP30301 263 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 PAPOLAP51003 745 aaKnown RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 NDST2P52849 883 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 FANCCQ00597 558 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 RAD51Q06609 339 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 ZNF211Q13398 564 aaPredicted RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 FZD2Q14332 565 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 KLHL40Q2TBA0 621 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 ZNF542PQ5EBM4 170 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 FIGNQ5HY92 759 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 LRRC73Q5JTD7 316 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 KYAT3Q6YP21 454 aaKnown RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 CYP4V2Q6ZWL3 525 aaPredicted RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 DCP2Q8IU60 420 aaKnown RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 CENPTQ96BT3 561 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 ZNF653Q96CK0 615 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 IFT43Q96FT9 208 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 EXOC2Q96KP1 924 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 KCTD15Q96SI1 283 aaPredicted RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 SNRNP25Q9BV90 132 aaKnown RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 CPEB1Q9BZB8 566 aaKnown RBP10.42□□□□□ -0.74
CLK3-205ENST00000561673 SLC39A8Q9C0K1 460 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 ISCUQ9H1K1 167 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 PDFQ9HBH1 243 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 GPR27Q9NS67 375 aa10.42□□□□□ -0.74
CLK3-205ENST00000561673 DONSONQ9NYP3 566 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms