RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 M0QZ92 97 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 TFAP2AP05549 437 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 RAG1P15918 1043 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PCSK1P29120 753 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 CCR3P51677 355 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 HNRNPDQ14103 355 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ARL13AQ5H913 290 aaPredicted RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 SNX32Q86XE0 403 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 SLC41A1Q8IVJ1 513 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ATPAF2Q8N5M1 289 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 C3orf58Q8NDZ4 430 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 NUF2Q9BZD4 464 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 KLHL4Q9C0H6 718 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 DRC3Q9H069 523 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 FAM105AQ9NUU6 356 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PACSIN3Q9UKS6 424 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 AAR2Q9Y312 384 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 SHROOM3Q8TF72 1996 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 HHLA1C9JL84 531 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 MATN2O00339 956 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PSMD3O43242 534 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 CABYRO75952 493 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 CLPTM1O96005 669 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 MT-CYBP00156 380 aaPredicted RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 THRAP10827 490 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 GLDCP23378 1020 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PIK3R1P27986 724 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 SLC12A1Q13621 1099 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 TRIP10Q15642 601 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ARHGAP36Q6ZRI8 547 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 RDH11Q8TC12 318 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 GDPD5Q8WTR4 605 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 TBL1YQ9BQ87 522 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 KIFC1Q9BW19 673 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 CPA4Q9UI42 421 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ADAMTS6Q9UKP5 1117 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 TMA7Q9Y2S6 64 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PCDHGB5Q9Y5G0 923 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 TSC2P49815 1807 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 UNCXA6NJT0 531 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 DDHD2O94830 711 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 VAPBO95292 243 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 AHSGP02765 367 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 BDNFP23560 247 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 SCNN1GP51170 649 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 MTTPP55157 894 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 CTBP1Q13363 440 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ZNF460Q14592 562 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 UGP2Q16851 508 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 LSM12Q3MHD2 195 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PAN2Q504Q3 1202 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 SMUG1Q53HV7 270 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 PCID2Q5JVF3 399 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 DENND6AQ8IWF6 608 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 DQX1Q8TE96 717 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 GCNAQ96QF7 691 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 MCMBPQ9BTE3 642 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
NEIL1-202ENST00000561643 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 FLRT1Q9NZU1 646 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 NDUFA13Q9P0J0 144 aa11.1□□□□□ -0.63
NEIL1-202ENST00000561643 CTSHP09668 335 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
NEIL1-202ENST00000561643 SLC35E2BP0CK96 405 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 TFEBP19484 476 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 DNAJB2P25686 324 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 CD97P48960 835 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 OXCT1P55809 520 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 MPP1Q00013 466 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 PRKAA1Q13131 559 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 MYLK3Q32MK0 819 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 GRAMD1BQ3KR37 738 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 PPM1LQ5SGD2 360 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 C6orf183Q5T699 404 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 PM20D1Q6GTS8 502 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 UGT2A3Q6UWM9 527 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 FSTL5Q8N475 847 aaPredicted RBP11.09□□□□□ -0.63
NEIL1-202ENST00000561643 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 DIS3LQ8TF46 1054 aaKnown RBP11.09□□□□□ -0.63
NEIL1-202ENST00000561643 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 FICDQ9BVA6 458 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 C1QTNF1Q9BXJ1 281 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 XPR1Q9UBH6 696 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 ST3GAL5Q9UNP4 418 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 ACOT9Q9Y305 439 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 CD1EP15812 388 aa11.09□□□□□ -0.63
NEIL1-202ENST00000561643 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
NEIL1-202ENST00000561643 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms