RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ANKRD20A3Q5VUR7 823 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 ZNF776Q68DI1 518 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-221ENST00000561276 DRICH1Q6PGQ1 229 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-221ENST00000561276 GDPD4Q6W3E5 623 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 RASSF3Q86WH2 238 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 CACUL1Q86Y37 369 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 ZNF567Q8N184 647 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 FAM71DQ8N9W8 422 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 ARRDC2Q8TBH0 407 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 PIP4K2CQ8TBX8 421 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 GRIN3AQ8TCU5 1115 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 NKD2Q969F2 451 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-221ENST00000561276 MAGOHBQ96A72 148 aaKnown RBP10.41□□□□□ -0.74
LRRC28-221ENST00000561276 VOPP1Q96AW1 172 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 LRIG1Q96JA1 1093 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 NSMCE3Q96MG7 304 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 NUDCD1Q96RS6 583 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 SEMA3CQ99985 751 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 MGME1Q9BQP7 344 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 POLR1EQ9GZS1 481 aaKnown RBP10.41□□□□□ -0.74
LRRC28-221ENST00000561276 NOD2Q9HC29 1040 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 ITM2CQ9NQX7 267 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 PRMT8Q9NR22 394 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-221ENST00000561276 HAUS2Q9NVX0 235 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 RNF14Q9UBS8 474 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 FBXO4Q9UKT5 387 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 TRHDEQ9UKU6 1024 aa10.41□□□□□ -0.74
LRRC28-221ENST00000561276 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 CFAP69A5D8W1 941 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 C1QTNF3-AMACRE9PGA6 284 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 PDE2AO00408 941 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 KPNA3O00505 521 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 URI1O94763 535 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 STK10O94804 968 aaKnown RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 DNTTP04053 509 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 UGT2B4P06133 528 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 TDGF1P13385 188 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 C5AR1P21730 350 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 CD68P34810 354 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 PSMD8P48556 350 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 TPMTP51580 245 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 METAP1P53582 386 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 GDF10P55107 478 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 AP1S1P61966 158 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 DSC2Q02487 901 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 ZBTB16Q05516 673 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 BCL2L1Q07817 233 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 DMWDQ09019 674 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 NIPAL4Q0D2K0 466 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 IHHQ14623 411 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 CYP1B1Q16678 543 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 POM121L1PQ3SYA9 428 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 RALGPS1Q5JS13 557 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 FAM46CQ5VWP2 391 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 ALG1LQ6GMV1 187 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 NCEH1Q6PIU2 408 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 KIAA1324Q6UXG2 1013 aaKnown RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 CAMK1DQ8IU85 385 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 ATL2Q8NHH9 583 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 KLHL32Q96NJ5 620 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 TUBGCP5Q96RT8 1024 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 MFRPQ9BY79 579 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 TPSD1Q9BZJ3 242 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 SUV39H2Q9H5I1 410 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 GLOD4Q9HC38 313 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 KLHL8Q9P2G9 620 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-221ENST00000561276 SCML1Q9UN30 329 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 PCDHGC4Q9Y5F7 938 aa10.4□□□□□ -0.74
LRRC28-221ENST00000561276 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 PLXND1Q9Y4D7 1925 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC163A0A0D9SF12 145 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 GOLGA6L10A0A0M3HER8 536 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 C5orf60A6NFR6 353 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ESPNB1AK53 854 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 PLK4O00444 970 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 AXIN1O15169 862 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 MID1O15344 667 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 GCATO75600 419 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF189O75820 626 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 PIGNO95427 931 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ADH1BP00325 375 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 MMP2P08253 660 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 SERPINF2P08697 491 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 SP9P0CG40 484 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ETS1P14921 441 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 NFKB1P19838 968 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 SERPINA4P29622 427 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 COILP38432 576 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 MAPK8P45983 427 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 FNTBP49356 437 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 LMNB2Q03252 620 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 SFSWAPQ12872 951 aaKnown RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF528Q3MIS6 628 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF805Q5CZA5 627 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 TTC27Q6P3X3 843 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC137Q6PK04 289 aaKnown RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 GSTA5Q7RTV2 222 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 PRPF39Q86UA1 669 aaKnown RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 HDDC3Q8N4P3 179 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms