RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 GDPD4Q6W3E5 623 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 CCDC129Q6ZRS4 1044 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 SLC44A2Q8IWA5 706 aaPredicted RBP3.35□□□□□ -1.87
USP8-216ENST00000561206 IL17RCQ8NAC3 791 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 STT3BQ8TCJ2 826 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 SGCZQ96LD1 299 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 OR1F2PQ96R84 312 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 DDX23Q9BUQ8 820 aaKnown RBP3.35□□□□□ -1.87
USP8-216ENST00000561206 CXorf56Q9H5V9 222 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 ELAC1Q9H777 363 aaKnown RBP3.35□□□□□ -1.87
USP8-216ENST00000561206 WDR6Q9NNW5 1121 aaKnown RBP3.35□□□□□ -1.87
USP8-216ENST00000561206 TMLHEQ9NVH6 421 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 NDUFAF4Q9P032 175 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 PHTF1Q9UMS5 762 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 DHDHQ9UQ10 334 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 CPED1A4D0V7 1026 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 STRNO43815 780 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 GAGE7O76087 117 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 VNN2O95498 520 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 TFRCP02786 760 aaKnown RBP3.34□□□□□ -1.87
USP8-216ENST00000561206 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 ACP5P13686 325 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 ARSAP15289 507 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 SSTR2P30874 369 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 PNLIPRP1P54315 467 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 PHEXP78562 749 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 GAGE1Q13065 139 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 GAGE4Q13068 117 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 RPS6KA2Q15349 733 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 DCAF6Q58WW2 860 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 TRMT1LQ7Z2T5 733 aaKnown RBP3.34□□□□□ -1.87
USP8-216ENST00000561206 KRTAP7-1Q8IUC3 87 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 GALNT15Q8N3T1 639 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 MAB21L3Q8N8X9 362 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 SCAMP5Q8TAC9 235 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 TRIB2Q92519 343 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 MTBPQ96DY7 904 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 C8orf48Q96LL4 319 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 PABPC3Q9H361 631 aaKnown RBP3.34□□□□□ -1.87
USP8-216ENST00000561206 OBP2BQ9NPH6 170 aa3.34□□□□□ -1.87
USP8-216ENST00000561206 CACNA1FO60840 1977 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 LGALS16A8MUM7 142 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 P2RY10O00398 339 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 EDIL3O43854 480 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 CBX6O95503 412 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 APOHP02749 345 aaPredicted RBP3.33□□□□□ -1.88
USP8-216ENST00000561206 GJC1P36383 396 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 TECP42680 631 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 MTNR1AP48039 350 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 NLRP5P59047 1200 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 AP2B1P63010 937 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 ECT2LQ008S8 904 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 ZBTB17Q13105 803 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 HLTFQ14527 1009 aaKnown RBP eCLIP3.33□□□□□ -1.88
USP8-216ENST00000561206 LPIN1Q14693 890 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 RPE65Q16518 533 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 ACCSLQ4AC99 568 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 LRRC24Q50LG9 513 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 C14orf177Q52M58 125 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 CCDC181Q5TID7 509 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 LIN54Q6MZP7 749 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 KLHDC8BQ8IXV7 354 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 ZNF441Q8N8Z8 693 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 MCPH1Q8NEM0 835 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 USP13Q92995 863 aaPredicted RBP3.33□□□□□ -1.88
USP8-216ENST00000561206 DUX3Q96PT4 197 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 MYD88Q99836 296 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 CHST12Q9NRB3 414 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 SMARCAL1Q9NZC9 954 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 OR6C3Q9NZP0 311 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 LRFN1Q9P244 771 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 PAM16Q9Y3D7 125 aa3.33□□□□□ -1.88
USP8-216ENST00000561206 OR6C68A6NDL8 312 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 FAM90A20PA6NIJ5 464 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 HNRNPCL2B2RXH8 293 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 FAM157AC9JC47 383 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 FFAR2O15552 330 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 KDM4BO94953 1096 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 CRYAAP02489 173 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 CTPS1P17812 591 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 PPM1AP35813 382 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 ZNF132P52740 706 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 ATP12AP54707 1039 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 DENND6AQ8IWF6 608 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 MB21D2Q8IYB1 491 aaPredicted RBP3.32□□□□□ -1.88
USP8-216ENST00000561206 CCDC105Q8IYK2 499 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 KBTBD3Q8NAB2 608 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 C3orf49Q96BT1 292 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 LRFN5Q96NI6 719 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 MMTAG2Q9BU76 263 aaKnown RBP3.32□□□□□ -1.88
USP8-216ENST00000561206 SCRT2Q9NQ03 307 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 ZFP57Q9NU63 452 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 THAP1Q9NVV9 213 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 ZNF224Q9NZL3 707 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 NLKQ9UBE8 527 aa3.32□□□□□ -1.88
USP8-216ENST00000561206 SYT5O00445 386 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms