RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZNF354CQ86Y25 554 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 CASKIN2Q8WXE0 1202 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 ARHGEF26Q96DR7 871 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 KLHL32Q96NJ5 620 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 MCEEQ96PE7 176 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 CNPY3Q9BT09 278 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 NLGN3Q9NZ94 848 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 GGT7Q9UJ14 662 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 FZD10Q9ULW2 581 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 CLCA2Q9UQC9 943 aa16.46■□□□□ 0.23
SNX1-213ENST00000561026 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 FPGTO14772 594 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 AREL1O15033 823 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 SCAMP1O15126 338 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 SPINT1O43278 529 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 CREB3O43889 395 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 TMCC1O94876 653 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 CSF2P04141 144 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 ALPPL2P10696 532 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 CKMT1AP12532 417 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 AIF1P55008 147 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 YBEYP58557 167 aaPredicted RBP16.45■□□□□ 0.22
SNX1-213ENST00000561026 GDPD4Q6W3E5 623 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 TTC7BQ86TV6 843 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 PARGQ86W56 976 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 MCOLN2Q8IZK6 566 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 DCBLD1Q8N8Z6 715 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 BAP1Q92560 729 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 GDAP1L1Q96MZ0 367 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 EPAS1Q99814 870 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 TTYH3Q9C0H2 523 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 KLC2Q9H0B6 622 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 ITM2BQ9Y287 266 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 AK5Q9Y6K8 562 aa16.45■□□□□ 0.22
SNX1-213ENST00000561026 IGSF10Q6WRI0 2623 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 WASH4PA8MWX3 477 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 ATP1A3P13637 1013 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 NME1P15531 152 aaKnown RBP16.44■□□□□ 0.22
SNX1-213ENST00000561026 FERP16591 822 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 PFN3P60673 137 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 SEMG2Q02383 582 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 RAD51Q06609 339 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 SERINC3Q13530 473 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 PARP15Q460N3 678 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 DCUN1D2Q6PH85 259 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 TMC6Q7Z403 805 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 IRF2BP2Q7Z5L9 587 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 UMODL1-AS1Q8N2C9 162 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 FAM181AQ8N9Y4 354 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 CENPTQ96BT3 561 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 HMCESQ96FZ2 354 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 APOLD1Q96LR9 279 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 DUSP23Q9BVJ7 150 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 CATSPERBQ9H7T0 1116 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 IPO11Q9UI26 975 aaKnown RBP16.44■□□□□ 0.22
SNX1-213ENST00000561026 KLF15Q9UIH9 416 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 MFHAS1Q9Y4C4 1052 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 ASXL3Q9C0F0 2248 aa16.44■□□□□ 0.22
SNX1-213ENST00000561026 TDRD6O60522 2096 aaKnown RBP16.44■□□□□ 0.22
SNX1-213ENST00000561026 RASA4BC9J798 803 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 K7ESM1 405 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 RASA4O43374 803 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 NEBLO76041 1014 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 IGSF6O95976 241 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 MT-CO3P00414 261 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 RHOAP61586 193 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 OGDHQ02218 1023 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 PDE1CQ14123 709 aaPredicted RBP16.43■□□□□ 0.22
SNX1-213ENST00000561026 CCDC183Q5T5S1 534 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 NETO2Q8NC67 525 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 ZNF548Q8NEK5 533 aaPredicted RBP16.43■□□□□ 0.22
SNX1-213ENST00000561026 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 TAS2R14Q9NYV8 317 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 DKK3Q9UBP4 350 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 CSNK1G3Q9Y6M4 447 aa16.43■□□□□ 0.22
SNX1-213ENST00000561026 LY6G6EA0A0G2JKS1 128 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 H3BM21 787 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 FGF10O15520 208 aaPredicted RBP16.42■□□□□ 0.22
SNX1-213ENST00000561026 GP1BAP07359 652 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 MYF5P13349 255 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 DESP17661 470 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 TNFAIP3P21580 790 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 MAMLD1Q13495 774 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 LRRC73Q5JTD7 316 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 TPRG1LQ5T0D9 272 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 KDM7AQ6ZMT4 941 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 AOPEPQ8N6M6 819 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 CPEB1Q9BZB8 566 aaKnown RBP16.42■□□□□ 0.22
SNX1-213ENST00000561026 USP29Q9HBJ7 922 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 MYO6Q9UM54 1294 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 U3KQA8 63 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 MYLKQ15746 1914 aa16.42■□□□□ 0.22
SNX1-213ENST00000561026 SMG1Q96Q15 3661 aaKnown RBP16.41■□□□□ 0.22
SNX1-213ENST00000561026 TEX33O43247 280 aa16.41■□□□□ 0.22
SNX1-213ENST00000561026 TLX3O43711 291 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms