RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MINDY2Q8NBR6 621 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 BHLHE22Q8NFJ8 381 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 RP9Q8TA86 221 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ATP2A3Q93084 1043 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 TOP1MTQ969P6 601 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 NT5C3BQ969T7 300 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 FAM149B1Q96BN6 582 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 SORT1Q99523 831 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 MRPL40Q9NQ50 206 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 DTLQ9NZJ0 730 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ZC3H7BQ9UGR2 993 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 SEPT3Q9UH03 358 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ERGIC3Q9Y282 383 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 MFHAS1Q9Y4C4 1052 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 TSC2P49815 1807 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 RGSL1A5PLK6 1076 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 FAM159BA6NKW6 160 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 M0QZ92 97 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 KPNA4O00629 521 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 TNPO2O14787 897 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 DCXO43602 365 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 LYPLA1O75608 230 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 DGKIO75912 1065 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 GSRP00390 522 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ARL4AP40617 200 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 MAGEA3P43357 314 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 PITX1P78337 314 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 IKBKEQ14164 716 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 DCAF6Q58WW2 860 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 IRAK1BP1Q5VVH5 260 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 CLEC20AQ6ZU45 233 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 RSPH3Q86UC2 560 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 PDPRQ8NCN5 879 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 CNDP2Q96KP4 475 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ZNF512Q96ME7 567 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 SLC2A13Q96QE2 648 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 NPY6RQ99463 290 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 TMEM79Q9BSE2 394 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 MTG1Q9BT17 334 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 MED10Q9BTT4 135 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 SHCBP1LQ9BZQ2 653 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 RPF2Q9H7B2 306 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 PLAC1Q9HBJ0 212 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 HACD3Q9P035 362 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 CACNG4Q9UBN1 327 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 IPO11Q9UI26 975 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ST3GAL5Q9UNP4 418 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ZNF638Q14966 1978 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 A0A1B0GTW7 788 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 LSM1O15116 133 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 SNAP91O60641 907 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A9O60656 530 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 XRCC1P18887 633 aaPredicted RBP14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A6P19224 532 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 TPSB2P20231 275 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A1P22309 533 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A4P22310 534 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 NOS2P35228 1153 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A3P35503 534 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A5P35504 534 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 NDUFV1P49821 464 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 ABCE1P61221 599 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 TPSAB1Q15661 275 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 INSCQ1MX18 579 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 IL23RQ5VWK5 629 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 NANOGP8Q6NSW7 305 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 EPGNQ6UW88 154 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 ZNF534Q76KX8 674 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 DSELQ8IZU8 1212 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 EFCAB3Q8N7B9 438 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 PCYOX1LQ8NBM8 494 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 SENP8Q96LD8 212 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 FERMT1Q9BQL6 677 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A7Q9HAW7 530 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A10Q9HAW8 530 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 UGT1A8Q9HAW9 530 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 PRDM16Q9HAZ2 1276 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 CRTAC1Q9NQ79 661 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 FAM105AQ9NUU6 356 aa14.12□□□□□ -0.15
RABGGTA-220ENST00000560998 C7orf72A4D263 438 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 CXorf49A8MYA2 514 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 HACD1B0YJ81 288 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 CFAP99D6REC4 459 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 GIPC1O14908 333 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 PLIN3O60664 434 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 STAMBPO95630 424 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 NFKBIAP25963 317 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 CTGFP29279 349 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 EPHA3P29320 983 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 AFF1P51825 1210 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 HK2P52789 917 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 GJA9P57773 515 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 BMPR2Q13873 1038 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 GNASQ5JWF2 1037 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 HEATR6Q6AI08 1181 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 GDF6Q6KF10 455 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms