RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 NCKAP1Q9Y2A7 1128 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC9A8Q9Y2E8 581 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 COQ6Q9Y2Z9 468 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 GSAPA4D1B5 854 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 ABLIM1O14639 778 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 BMP7P18075 431 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC26A3P40879 764 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 RAB10P61026 200 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TAF13Q15543 124 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CLYBLQ8N0X4 340 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PHF10Q8WUB8 498 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 SENP8Q96LD8 212 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PORCNQ9H237 461 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TUBA8Q9NY65 449 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CLUHO75153 1309 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 XYLBO75191 536 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 OTCP00480 354 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 NR2F6P10588 404 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 DRD4P21917 467 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PSEN1P49768 467 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 BCAP31P51572 246 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 FOXR1Q6PIV2 292 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 KLHL24Q6TFL4 600 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 GPR180Q86V85 440 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PRELID2Q8N945 189 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 C18orf25Q96B23 403 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 REXO5Q96IC2 774 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PLEKHG4BQ96PX9 1271 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CCDC28BQ9BUN5 200 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC39A8Q9C0K1 460 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CLK4Q9HAZ1 481 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TCRBV5S4A2TA0A5A2 114 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 SERPINA1P01009 418 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 USP17L7P0C7H9 530 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 PTPN1P18031 435 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 FGFR3P22607 806 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 GABRB2P47870 512 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CCNIQ14094 377 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 EARS2Q5JPH6 523 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 LIPMQ5VYY2 423 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 FOXR2Q6PJQ5 311 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRAPPC5Q8IUR0 188 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 BSNDQ8WZ55 320 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 PPP1R16AQ96I34 528 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ASB8Q9H765 288 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 RAPGEFL1Q9UHV5 662 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 DHRS12A0PJE2 317 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 PDE2AO00408 941 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ALOX5P09917 674 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 HGFP14210 728 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNF846Q147U1 533 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 PCBP1Q15365 356 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 LY6KQ17RY6 165 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 R3HCC1LQ7Z5L2 792 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 MTMR9Q96QG7 549 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CORO1CQ9ULV4 474 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 FSCN2O14926 492 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 KRT36O76013 467 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 FGRP09769 529 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CCR4P51679 360 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 OLR1P78380 273 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 MTAPQ13126 283 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 FBXL19Q6PCT2 694 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 GPRIN3Q6ZVF9 776 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CXXC5Q7LFL8 322 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 DNAJB14Q8TBM8 379 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ABCB10Q9NRK6 738 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 FBXO10Q9UK96 956 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC9A3R1O14745 358 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ALOX15BO15296 676 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 ENTPD5O75356 428 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 DBTP11182 482 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 IDO1P14902 403 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 IL12AP29459 219 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CAPGP40121 348 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 NUMBP49757 651 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 SNRPD1P62314 119 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 GTF2BQ00403 316 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 HSPA14Q0VDF9 509 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 INTS5Q6P9B9 1019 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRIM40Q6P9F5 258 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 GCNT7Q6ZNI0 430 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 COLGALT2Q8IYK4 626 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CHPFQ8IZ52 775 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 CAPSLQ8WWF8 208 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms