RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 C20orf141Q9NUB4 165 aa4.03□□□□□ -1.76
USP8-211ENST00000560527 PLEKHB1Q9UF11 243 aaPredicted RBP4.03□□□□□ -1.76
USP8-211ENST00000560527 CKAP5Q14008 2032 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 IGLV5-39A0A0G2JS06 123 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 WDR91A4D1P6 747 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 TACC1O75410 805 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 SEC14L2O76054 403 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 NDUFB8O95169 186 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 FGF2P09038 288 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 HOXB5P09067 269 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 HSPA1AP0DMV8 641 aaKnown RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 HSPA1BP0DMV9 641 aaKnown RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 CAPN3P20807 821 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 POU1F1P28069 291 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 AVPR1AP37288 418 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 CASP2P42575 452 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 EIF5P55010 431 aaKnown RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 RPL7AP62424 266 aaKnown RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 GSTA3Q16772 222 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 HIST2H2ACQ16777 129 aaPredicted RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 DUSP6Q16828 381 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 TXNDC8Q6A555 127 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 FAM180BQ6P0A1 224 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 MOB3CQ70IA8 216 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 CADM3Q8N126 398 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 HORMAD2Q8N7B1 307 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 GABPB2Q8TAK5 448 aaPredicted RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 ETNPPLQ8TBG4 499 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 METTL6Q8TCB7 284 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 NEK9Q8TD19 979 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 LPAR1Q92633 364 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 ATOH1Q92858 354 aaPredicted RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 OTULINQ96BN8 352 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 KLHL15Q96M94 604 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 H2AFJQ9BTM1 129 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 CDT1Q9H211 546 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 PRKRIP1Q9H875 184 aaPredicted RBP4.02□□□□□ -1.77
USP8-211ENST00000560527 NCKIPSDQ9NZQ3 722 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 AASSQ9UDR5 926 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 PNMA2Q9UL42 364 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 CAMK2AQ9UQM7 478 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 RAI2Q9Y5P3 530 aa4.02□□□□□ -1.77
USP8-211ENST00000560527 CACNA1IQ9P0X4 2223 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 TMEM272A0A1B0GTI8 110 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 STMND1H3BQB6 276 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 CCNDBP1O95273 360 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 CLDN7O95471 211 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 SCGB1D1O95968 90 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 CHRNB2P17787 502 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 DCTDP32321 178 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 BSGP35613 385 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 POLD2P49005 469 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 DCAF7P61962 342 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 NEXNQ0ZGT2 675 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 RABEP1Q15276 862 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 ETFDHQ16134 617 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 EPHA10Q5JZY3 1008 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 TMEM71Q6P5X7 295 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 SLC16A12Q6ZSM3 486 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 SLC46A3Q7Z3Q1 461 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 PATL1Q86TB9 770 aaKnown RBP4.01□□□□□ -1.77
USP8-211ENST00000560527 TBC1D1Q86TI0 1168 aaPredicted RBP4.01□□□□□ -1.77
USP8-211ENST00000560527 TBC1D26Q86UD7 250 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 DENND6AQ8IWF6 608 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 CCDC105Q8IYK2 499 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 ENGASEQ8NFI3 743 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 RASSF8Q8NHQ8 419 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 CEP76Q8TAP6 659 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 SLC35F5Q8WV83 523 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 UCMAQ8WVF2 138 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 SNAPC3Q92966 411 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 VOPP1Q96AW1 172 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 NLRP4Q96MN2 994 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 SPRTNQ9H040 489 aaPredicted RBP4.01□□□□□ -1.77
USP8-211ENST00000560527 USP44Q9H0E7 712 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 RANBP17Q9H2T7 1088 aaKnown RBP4.01□□□□□ -1.77
USP8-211ENST00000560527 MVB12BQ9H7P6 319 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 ZBTB40Q9NUA8 1239 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 POT1Q9NUX5 634 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 ANKRD10Q9NXR5 420 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 ORC3Q9UBD5 711 aaPredicted RBP4.01□□□□□ -1.77
USP8-211ENST00000560527 A4GNTQ9UNA3 340 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 CARD8Q9Y2G2 431 aa4.01□□□□□ -1.77
USP8-211ENST00000560527 TTC3P53804 2025 aa4□□□□□ -1.77
USP8-211ENST00000560527 PGPEP1LA6NFU8 196 aa4□□□□□ -1.77
USP8-211ENST00000560527 NPIPB15A6NHN6 443 aaPredicted RBP4□□□□□ -1.77
USP8-211ENST00000560527 HMGB1P1B2RPK0 211 aaPredicted RBP4□□□□□ -1.77
USP8-211ENST00000560527 LDLRAD4O15165 306 aa4□□□□□ -1.77
USP8-211ENST00000560527 CDK4P11802 303 aa4□□□□□ -1.77
USP8-211ENST00000560527 ARSBP15848 533 aa4□□□□□ -1.77
USP8-211ENST00000560527 SRD5A1P18405 259 aa4□□□□□ -1.77
USP8-211ENST00000560527 TNFRSF1BP20333 461 aa4□□□□□ -1.77
USP8-211ENST00000560527 GNLYP22749 145 aa4□□□□□ -1.77
USP8-211ENST00000560527 HARS2P49590 506 aaKnown RBP4□□□□□ -1.77
USP8-211ENST00000560527 CTCFP49711 727 aaPredicted RBP4□□□□□ -1.77
USP8-211ENST00000560527 EFNA5P52803 228 aa4□□□□□ -1.77
USP8-211ENST00000560527 CDH12P55289 794 aa4□□□□□ -1.77
USP8-211ENST00000560527 SELENOVP59797 346 aa4□□□□□ -1.77
USP8-211ENST00000560527 ZP1P60852 638 aa4□□□□□ -1.77
USP8-211ENST00000560527 FAM27E3Q08E93 113 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms