RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 THSD4Q6ZMP0 1018 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 ENOSF1Q7L5Y1 443 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 RAB11FIP2Q7L804 512 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 FMR1NBQ8N0W7 255 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 SNRNP27Q8WVK2 155 aaKnown RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 SCG3Q8WXD2 468 aaKnown RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 EXTL1Q92935 676 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 PRR11Q96HE9 360 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 GFM1Q96RP9 751 aaKnown RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 C1QTNF7Q9BXJ2 289 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 FOXP3Q9BZS1 431 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 HECAQ9UBI9 543 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 PISDQ9UG56 409 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 IL17BQ9UHF5 180 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 ATXN7L1Q9ULK2 861 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 CNTN6Q9UQ52 1028 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 ZDHHC9Q9Y397 364 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 ANKRD36A6QL64 1941 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 HECTD1Q9ULT8 2610 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 C16orf96A6NNT2 1141 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 BIN1O00499 593 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 CASC3O15234 703 aaKnown RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 SPINT1O43278 529 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TSPAN6O43657 245 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 AP1G1O43747 822 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 GCATO75600 419 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 UGT2B4P06133 528 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 HGFP14210 728 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TFE3P19532 575 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 XPAP23025 273 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 GKP32189 559 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 MLLT3P42568 568 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 ABL2P42684 1182 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 PPARDQ03181 441 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 BECN1Q14457 450 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 POLD3Q15054 466 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TGIF1Q15583 401 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TPRG1LQ5T0D9 272 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 FAM102AQ5T9C2 384 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TTI2Q6NXR4 508 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 OLFML1Q6UWY5 402 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 ATG14Q6ZNE5 492 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 RD3Q7Z3Z2 195 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 CLEC14AQ86T13 490 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 ZSCAN30Q86W11 494 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 HID1Q8IV36 788 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TRIM59Q8IWR1 403 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 SDR16C5Q8N3Y7 309 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 ZSCAN1Q8NBB4 408 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 DENND6BQ8NEG7 585 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 CXorf40AQ8TE69 158 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 CCDC74AQ96AQ1 378 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 ARHGEF26Q96DR7 871 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 SGF29Q96ES7 293 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 FAM81BQ96LP2 452 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 LRRC61Q9BV99 259 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 BOCQ9BWV1 1114 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 SRRTQ9BXP5 876 aaKnown RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 CPEB1Q9BZB8 566 aaKnown RBP10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 CEP44Q9C0F1 390 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 PLCB1Q9NQ66 1216 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 TMPRSS4Q9NRS4 437 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 RRN3Q9NYV6 651 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 SEPT10Q9P0V9 454 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 GGT7Q9UJ14 662 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
CDC42BPB-207ENST00000560492 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 SCN8AQ9UQD0 1980 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 ILVBLA1L0T0 632 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 LMO7DNF2Z398 122 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 GOLGA8SH3BPF8 625 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 YY2O15391 372 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 LZTS3O60299 673 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 F9P00740 461 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 RPLP0P05388 317 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 FAM87AP0C7U9 286 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 TSHRP16473 764 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 UGT1A5P35504 534 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 IGFALSP35858 605 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 EIF4A3P38919 411 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 CXCR3P49682 368 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 INHBCP55103 352 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 SKOR1P84550 965 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 GNA12Q03113 381 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 PAK1Q13153 545 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 ELOCQ15369 112 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 ARL13BQ3SXY8 428 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 C5orf22Q49AR2 442 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 PTPN20Q4JDL3 420 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 ZNF805Q5CZA5 627 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 RWDD4Q6NW29 188 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 TRIM65Q6PJ69 517 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 LEKR1Q6ZMV7 388 aa10.65□□□□□ -0.7
CDC42BPB-207ENST00000560492 B3GNT8Q7Z7M8 397 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms