RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 FSD1LQ9BXM9 530 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 CIPCQ9C0C6 399 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 TRPV5Q9NQA5 729 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 ELOVL2Q9NXB9 296 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 SLCO3A1Q9UIG8 710 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 TEX264Q9Y6I9 313 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 AP3B1O00203 1094 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 ATP9BO43861 1147 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 SRPRAP08240 638 aaKnown RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 KDSRQ06136 332 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 EIF4HQ15056 248 aaKnown RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 HP1BP3Q5SSJ5 553 aaPredicted RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 NAIF1Q69YI7 327 aaPredicted RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 DENND5AQ6IQ26 1287 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 NCEH1Q6PIU2 408 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 SRLQ86TD4 932 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 CSGALNACT1Q8TDX6 532 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 CYB5D2Q8WUJ1 264 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 UBLCP1Q8WVY7 318 aaPredicted RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 SORCS1Q8WY21 1168 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 APOL2Q9BQE5 337 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 ARNT2Q9HBZ2 717 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 NINJ2Q9NZG7 142 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 MYLKQ15746 1914 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 LOC285095A0A1B0GVY8 99 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 TTC4O95801 387 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 EPOP01588 193 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 AP1S1P61966 158 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 CDH17Q12864 832 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 DLG2Q15700 870 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 PCSK7Q16549 785 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 KYNUQ16719 465 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 PTPRNQ16849 979 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 PREPLQ4J6C6 727 aaPredicted RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 ATXN7L2Q5T6C5 722 aaPredicted RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 DNAAF3Q8N9W5 541 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 MYO19Q96H55 970 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 FEM1CQ96JP0 617 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 C9orf72Q96LT7 481 aa12.33□□□□□ -0.44
HERC1-205ENST00000559886 PIH1D1Q9NWS0 290 aaKnown RBP12.33□□□□□ -0.44
HERC1-205ENST00000559886 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 MAP2K7O14733 419 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 RIPK2O43353 540 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 NNMTP40261 264 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 ELK3P41970 407 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 NPY2RP49146 381 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 SESN2P58004 480 aaPredicted RBP12.32□□□□□ -0.44
HERC1-205ENST00000559886 SNRPD1P62314 119 aaKnown RBP12.32□□□□□ -0.44
HERC1-205ENST00000559886 KDELC2Q7Z4H8 507 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 ANKMY2Q8IV38 441 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 PLPP6Q8IY26 295 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 FBXO36Q8NEA4 188 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 OR2AP1Q8NGE2 309 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 PYROXD1Q8WU10 500 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 TTC25Q96NG3 672 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 TNKS2Q9H2K2 1166 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
HERC1-205ENST00000559886 F5P12259 2224 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 ATP8B1O43520 1251 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 KAT7O95251 611 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 IGSF6O95976 241 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 GSRP00390 522 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 MGAT1P26572 445 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 GRIA2P42262 883 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 MAPK8P45983 427 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 CDK18Q07002 472 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 SLC1A5Q15758 541 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 UBAP2Q5T6F2 1119 aaKnown RBP12.32□□□□□ -0.44
HERC1-205ENST00000559886 IQCKQ8N0W5 287 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 MPP5Q8N3R9 675 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 TRIB3Q96RU7 358 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 VIPAS39Q9H9C1 493 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 LRRC4CQ9HCJ2 640 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 BFARQ9NZS9 450 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 PLA2G4CQ9UP65 541 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 CHMP2BQ9UQN3 213 aa12.32□□□□□ -0.44
HERC1-205ENST00000559886 TBC1D3BA6NDS4 549 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 SASH3O75995 380 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 CHRNA4P43681 627 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 SOX9P48436 509 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 IFT43Q96FT9 208 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms