RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 DLG2Q15700 870 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PTPN20Q4JDL3 420 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 TRNP1Q6NT89 227 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 BNIPLQ7Z465 357 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ERICH1Q86X53 443 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CILP2Q8IUL8 1156 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PASD1Q8IV76 773 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 SLC22A18ASQ8N1D0 253 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CACTIN-AS1Q8N1I8 211 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ARMC10Q8N2F6 343 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ATP6V0D2Q8N8Y2 350 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 DCBLD1Q8N8Z6 715 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CHST14Q8NCH0 376 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 OR2A12Q8NGT7 310 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PIP4K2CQ8TBX8 421 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 NT5C3BQ969T7 300 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ARRDC3Q96B67 414 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PDLIM2Q96JY6 352 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PPP1R13BQ96KQ4 1090 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 RPRD1AQ96P16 312 aaPredicted RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 NOX5Q96PH1 765 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 NPY6RQ99463 290 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 GTPBP4Q9BZE4 634 aaKnown RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 NRSN2Q9GZP1 204 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 GPR27Q9NS67 375 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ASNSD1Q9NWL6 643 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 DDIT4Q9NX09 232 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ARHGEF38Q9NXL2 777 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 COX16Q9P0S2 106 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 VANGL2Q9ULK5 521 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ZFR2Q9UPR6 939 aaKnown RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 DMTF1Q9Y222 760 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 HS3ST2Q9Y278 367 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.94□□□□□ -1.46
USP3-215ENST00000559771 CHD5Q8TDI0 1954 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 HELZ2Q9BYK8 2649 aaKnown RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 IGLV3-10A0A075B6K4 115 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 A0A0D9SEW6 157 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 A0A1W2PNU3 283 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 A0A1W2PQU0 124 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 BICDL2A1A5D9 508 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 DRGXA6NNA5 263 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PRAMEF26H0Y7S4 382 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 FOXN3O00409 490 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 CASC3O15234 703 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 ALOX15BO15296 676 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 RAD51BO15315 384 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 MED7O43513 233 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 SIGLEC6O43699 453 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 BRINP1O60477 761 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 RNGTTO60942 597 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 HSF2BPO75031 334 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 CLDN11O75508 207 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 DAB1O75553 588 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ZMPSTE24O75844 475 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 GNA14O95837 355 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 SLC2A3P11169 496 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PRLRP16471 622 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 JUNBP17275 347 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 DGKAP23743 735 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 RRM1P23921 792 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PPP1R2P41236 205 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ABCG1P45844 678 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ARRB1P49407 418 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 CDK17Q00537 523 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 SLC6A3Q01959 620 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 SEMG2Q02383 582 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 CETN1Q12798 172 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 OVGP1Q12889 678 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PAK1Q13153 545 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ZNF211Q13398 564 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 ILKQ13418 452 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 STIM1Q13586 685 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ARHGAP44Q17R89 818 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ZNF284Q2VY69 593 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 INAVAQ3KP66 663 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ACCSLQ4AC99 568 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 RAB6CQ53S08 254 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TPRG1LQ5T0D9 272 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 TTC39BQ5VTQ0 682 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 CDCP2Q5VXM1 449 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 RNF219Q5W0B1 726 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 SEL1L3Q68CR1 1132 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 LINGO4Q6UY18 593 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 KDM7AQ6ZMT4 941 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 GCNT7Q6ZNI0 430 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 SLC26A9Q7LBE3 791 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ABI3BPQ7Z7G0 1075 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 PRPF39Q86UA1 669 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 SLC47A2Q86VL8 602 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 IQCHQ86VS3 1027 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 C1orf131Q8NDD1 294 aaKnown RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 ZNF397Q8NF99 534 aaPredicted RBP5.93□□□□□ -1.46
USP3-215ENST00000559771 OR13H1Q8NG92 308 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 ZDHHC1Q8WTX9 485 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 OR8D1Q8WZ84 308 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 KLK6Q92876 244 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 SKA1Q96BD8 255 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 NXPE2Q96DL1 559 aa5.93□□□□□ -1.46
USP3-215ENST00000559771 CCDC34Q96HJ3 373 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms