RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 HORMAD1Q86X24 394 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 GAS2L3Q86XJ1 694 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 NAXDQ8IW45 347 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 TC2NQ8N9U0 490 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 TSC1Q92574 1164 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 TM7SF3Q9NS93 570 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 DONSONQ9NYP3 566 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 TPX2Q9ULW0 747 aaKnown RBP13.08□□□□□ -0.32
BMP4-208ENST00000559642 FADS3Q9Y5Q0 445 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 SPTBN2O15020 2390 aa13.08□□□□□ -0.32
BMP4-208ENST00000559642 UPK3BL1B0FP48 263 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 UPK3BL2E5RIL1 263 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 CEACAM1P13688 526 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 ZNF75DP51815 510 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 CCDC15Q0P6D6 951 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 FGL2Q14314 439 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 MESDQ14696 234 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
BMP4-208ENST00000559642 ZNF423Q2M1K9 1284 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 GDPD4Q6W3E5 623 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 TSEN2Q8NCE0 465 aaKnown RBP13.07□□□□□ -0.32
BMP4-208ENST00000559642 LRIG1Q96JA1 1093 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 OSBPL1AQ9BXW6 950 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 SLC32A1Q9H598 525 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 IPO11Q9UI26 975 aaKnown RBP13.07□□□□□ -0.32
BMP4-208ENST00000559642 DMTF1Q9Y222 760 aa13.07□□□□□ -0.32
BMP4-208ENST00000559642 TRPM6Q9BX84 2022 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 CNOT1A5YKK6 2376 aaKnown RBP13.06□□□□□ -0.32
BMP4-208ENST00000559642 PRAMEF26H0Y7S4 382 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 MUSKO15146 869 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 MFSD11O43934 449 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 PALMO75781 387 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 ZNF883P0CG24 379 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 ITIH2P19823 946 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 CCT8P50990 548 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 ARSEP51690 589 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 CLDN2P57739 230 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 NXPH1P58417 271 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 RAD51Q06609 339 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 IL10RBQ08334 325 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 SLC14A1Q13336 389 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 DPYSL3Q14195 570 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 TMEM259Q4ZIN3 620 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 SLC45A4Q5BKX6 768 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 NEK5Q6P3R8 708 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 SPATS2Q86XZ4 545 aaKnown RBP13.06□□□□□ -0.32
BMP4-208ENST00000559642 SLC35G2Q8TBE7 412 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 SETD7Q8WTS6 366 aaKnown RBP13.06□□□□□ -0.32
BMP4-208ENST00000559642 CINPQ9BW66 212 aaPredicted RBP13.06□□□□□ -0.32
BMP4-208ENST00000559642 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 BTBD3Q9Y2F9 522 aa13.06□□□□□ -0.32
BMP4-208ENST00000559642 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 TLR4O00206 839 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 NEMP1O14524 444 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 RAD51BO15315 384 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 AP1G1O43747 822 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 HNRNPA2B1P22626 353 aaKnown RBP13.05□□□□□ -0.32
BMP4-208ENST00000559642 IL4RP24394 825 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 PMLP29590 882 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 AKT2P31751 481 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 MAN1A1P33908 653 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 NUDT1P36639 197 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 SIM1P81133 766 aaPredicted RBP13.05□□□□□ -0.32
BMP4-208ENST00000559642 FOXC1Q12948 553 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 STAT4Q14765 748 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 SHBQ15464 509 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 KIAA1161Q6NSJ0 714 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 KDM7AQ6ZMT4 941 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 GCNT7Q6ZNI0 430 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 ATPAF2Q8N5M1 289 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 LZTR1Q8N653 840 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 MFSD2AQ8NA29 543 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 TMEM145Q8NBT3 493 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 RFFLQ8WZ73 363 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 SKA1Q96BD8 255 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 ELF4Q99607 663 aaPredicted RBP13.05□□□□□ -0.32
BMP4-208ENST00000559642 CAAP1Q9H8G2 361 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 PCOLCE2Q9UKZ9 415 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 NCOR2Q9Y618 2525 aa13.05□□□□□ -0.32
BMP4-208ENST00000559642 A0A1B0GTQ1 180 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 TTC24A2A3L6 582 aaPredicted RBP13.04□□□□□ -0.32
BMP4-208ENST00000559642 IGLON5A6NGN9 336 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 AREL1O15033 823 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 BUB1BO60566 1050 aaPredicted RBP13.04□□□□□ -0.32
BMP4-208ENST00000559642 MAFKO60675 156 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 CBFA2T3O75081 653 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 MAP3K6O95382 1288 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 TOP3BO95985 862 aaKnown RBP13.04□□□□□ -0.32
BMP4-208ENST00000559642 PEX11BO96011 259 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 PRKCGP05129 697 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 TIMP2P16035 220 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 SERPINB6P35237 376 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 RPS21P63220 83 aaKnown RBP13.04□□□□□ -0.32
BMP4-208ENST00000559642 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
BMP4-208ENST00000559642 LBRQ14739 615 aaKnown RBP13.04□□□□□ -0.32
BMP4-208ENST00000559642 ZFYVE27Q5T4F4 411 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms