RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CALN1Q9BXU9 219 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 OSBPL1AQ9BXW6 950 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 PACSIN1Q9BY11 444 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 LRRC19Q9H756 370 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 LHX3Q9UBR4 397 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 ITM2BQ9Y287 266 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 MFHAS1Q9Y4C4 1052 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 TRPM6Q9BX84 2022 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 A0A1B0GTQ1 180 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 SSU72P8A0A1W2PR75 194 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 AKR1B15C9JRZ8 316 aaPredicted RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 INSIG1O15503 277 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 DFNA5O60443 496 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PRAMEF11O60813 436 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PIGNO95427 931 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ITGAVP06756 1048 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 THEGLP0DJG4 465 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 HNRNPA2B1P22626 353 aaKnown RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 PMLP29590 882 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 SERPINB6P35237 376 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 GRK6P43250 576 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 HCAR3P49019 387 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 CLDN2P57739 230 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 NXPH1P58417 271 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 RPS21P63220 83 aaKnown RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 FAM193AP78312 1265 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 SLC25A11Q02978 314 aaKnown RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 IL10RBQ08334 325 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 SGCGQ13326 291 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 DPYSQ14117 519 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ZNF235Q14590 738 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 MESDQ14696 234 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 CYTH1Q15438 398 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 DPYSL2Q16555 572 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ZNF423Q2M1K9 1284 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ZNF284Q2VY69 593 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 TXNRD3NBQ6F5E7 133 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ARHGAP36Q6ZRI8 547 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PTAR1Q7Z6K3 402 aaPredicted RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 TTC7BQ86TV6 843 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 GATAD2AQ86YP4 633 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ARHGAP12Q8IWW6 846 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PLPP6Q8IY26 295 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 OXR1Q8N573 874 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ATPAF2Q8N5M1 289 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 LZTR1Q8N653 840 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 NIPA2Q8N8Q9 360 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 CXorf40AQ8TE69 158 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 NSMCE1Q8WV22 266 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 TEKT4Q8WW24 435 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 RAB7BQ96AH8 199 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 KLHDC7BQ96G42 594 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 FEM1CQ96JP0 617 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 CSPG4P5Q96PW8 444 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 CHP1Q99653 195 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ANP32EQ9BTT0 268 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 SLC17A9Q9BYT1 436 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 NHEJ1Q9H9Q4 299 aaPredicted RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 PDFQ9HBH1 243 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PCDH18Q9HCL0 1135 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 KLHL11Q9NVR0 708 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 UVRAGQ9P2Y5 699 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 IPO11Q9UI26 975 aaKnown RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 GGT7Q9UJ14 662 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PCOLCE2Q9UKZ9 415 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 ZFR2Q9UPR6 939 aaKnown RBP8.3□□□□□ -1.08
SNX1-207ENST00000559401 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 PCDHGB2Q9Y5G2 931 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 FADS3Q9Y5Q0 445 aa8.3□□□□□ -1.08
SNX1-207ENST00000559401 IGLON5A6NGN9 336 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 A6NNZ2 444 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 TSPAN6O43657 245 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 AP1G1O43747 822 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 HYAL3O43820 417 aaPredicted RBP8.29□□□□□ -1.08
SNX1-207ENST00000559401 SDC3O75056 442 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 PROSCO94903 275 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 PAK4O96013 591 aaPredicted RBP8.29□□□□□ -1.08
SNX1-207ENST00000559401 TMEM253P0C7T8 217 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 FTH1P19P0C7X4 201 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 SPINK2P20155 84 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 SERPINA4P29622 427 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 OVGP1Q12889 678 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 GRM3Q14832 879 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 ODF2Q5BJF6 829 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 TMCO4Q5TGY1 634 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 POLNQ7Z5Q5 900 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 SRLQ86TD4 932 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 IQCHQ86VS3 1027 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 SPATS2Q86XZ4 545 aaKnown RBP8.29□□□□□ -1.08
SNX1-207ENST00000559401 CPNE8Q86YQ8 564 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 BBS5Q8N3I7 341 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 KCTD6Q8NC69 237 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
SNX1-207ENST00000559401 OR13H1Q8NG92 308 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 CNTNAP3BQ96NU0 1288 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 CDC6Q99741 560 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 WRAP53Q9BUR4 548 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms