RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 EPAS1Q99814 870 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 CAAP1Q9H8G2 361 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 IPO11Q9UI26 975 aaKnown RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 GGT7Q9UJ14 662 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 APC2O95996 2303 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 K7ESM1 405 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 SPINT1O43278 529 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 IGSF6O95976 241 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 MT-CO3P00414 261 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 GP1BAP07359 652 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 DESP17661 470 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 CDK11BP21127 795 aaKnown RBP15.15■□□□□ 0.02
LRRC28-213ENST00000559399 EIF2S3P41091 472 aaKnown RBP15.15■□□□□ 0.02
LRRC28-213ENST00000559399 DUSP3P51452 185 aaPredicted RBP15.15■□□□□ 0.02
LRRC28-213ENST00000559399 AIF1P55008 147 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 SOWAHCQ53LP3 525 aaPredicted RBP15.15■□□□□ 0.02
LRRC28-213ENST00000559399 SCYL2Q6P3W7 929 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 GDPD4Q6W3E5 623 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 FAM181AQ8N9Y4 354 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 BAP1Q92560 729 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 MCEEQ96PE7 176 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 ERGIC2Q96RQ1 377 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 TTYH3Q9C0H2 523 aa15.15■□□□□ 0.02
LRRC28-213ENST00000559399 NOL6Q9H6R4 1146 aaKnown RBP15.15■□□□□ 0.02
LRRC28-213ENST00000559399 TCRBV5S1A1TA0A578 114 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 AREL1O15033 823 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 RRP8O43159 456 aaKnown RBP15.14■□□□□ 0.01
LRRC28-213ENST00000559399 TLX3O43711 291 aaPredicted RBP15.14■□□□□ 0.01
LRRC28-213ENST00000559399 CREB3O43889 395 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 OPA1O60313 960 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 BRINP1O60477 761 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 NEBLO76041 1014 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 YBEYP58557 167 aaPredicted RBP15.14■□□□□ 0.01
LRRC28-213ENST00000559399 PFN3P60673 137 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 RHOAP61586 193 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 RAD51Q06609 339 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 ACAP1Q15027 740 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 PARP15Q460N3 678 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 INO80DQ53TQ3 878 aaPredicted RBP15.14■□□□□ 0.01
LRRC28-213ENST00000559399 ZCCHC8Q6NZY4 707 aaKnown RBP15.14■□□□□ 0.01
LRRC28-213ENST00000559399 KDM7AQ6ZMT4 941 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 LRRC69Q6ZNQ3 347 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 TTC7BQ86TV6 843 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 SNIP1Q8TAD8 396 aaKnown RBP15.14■□□□□ 0.01
LRRC28-213ENST00000559399 HMCESQ96FZ2 354 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 CRELD1Q96HD1 420 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 CNPY3Q9BT09 278 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 C1QTNF7Q9BXJ2 289 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 CATSPERBQ9H7T0 1116 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 FZD10Q9ULW2 581 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 CSNK1G3Q9Y6M4 447 aa15.14■□□□□ 0.01
LRRC28-213ENST00000559399 PTPRBP23467 1997 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 LY6G6EA0A0G2JKS1 128 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 LRRC10BA6NIK2 292 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 WASH4PA8MWX3 477 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 RASA4BC9J798 803 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 FGF10O15520 208 aaPredicted RBP15.13■□□□□ 0.01
LRRC28-213ENST00000559399 AQP9O43315 295 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 RASA4O43374 803 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 MYF5P13349 255 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 FERP16591 822 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 JUNDP17535 347 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 RPL7AP62424 266 aaKnown RBP15.13■□□□□ 0.01
LRRC28-213ENST00000559399 PTK2BQ14289 1009 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 LRRC73Q5JTD7 316 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 PPP1R15BQ5SWA1 713 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 TPRG1LQ5T0D9 272 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 CDCP2Q5VXM1 449 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 DCUN1D2Q6PH85 259 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 APTXQ7Z2E3 356 aaKnown RBP15.13■□□□□ 0.01
LRRC28-213ENST00000559399 VPS36Q86VN1 386 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 CXorf40AQ8TE69 158 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 BTN2A2Q8WVV5 523 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 DEPDC7Q96QD5 511 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 KLC2Q9H0B6 622 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 ABCG4Q9H172 646 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 NCKIPSDQ9NZQ3 722 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 DKK3Q9UBP4 350 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 MFHAS1Q9Y4C4 1052 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 U3KQA8 63 aa15.13■□□□□ 0.01
LRRC28-213ENST00000559399 GOLGA6L22H0YM25 854 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
LRRC28-213ENST00000559399 TM7SF2O76062 418 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 ITPKBP27987 946 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 HTR7P34969 479 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 ACTN2P35609 894 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 IGFALSP35858 605 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 THOP1P52888 689 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 TPI1P60174 286 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 EIF2B5Q13144 721 aaKnown RBP15.12■□□□□ 0.01
LRRC28-213ENST00000559399 SERINC3Q13530 473 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 NCAPHQ15003 741 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 TBC1D25Q3MII6 688 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 ACAD10Q6JQN1 1059 aa15.12■□□□□ 0.01
LRRC28-213ENST00000559399 PPP1R2P3Q6NXS1 205 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms