RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PGRMC1O00264 195 aaKnown RBP21.94■■□□□ 1.1
SNX1-206ENST00000559389 LIASO43766 372 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 PIGNO95427 931 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 UGT2B4P06133 528 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 PRLRP16471 622 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 ITGB7P26010 798 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 SCNN1BP51168 640 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 PTPN5P54829 565 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 DSC2Q02487 901 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 USP39Q53GS9 565 aaKnown RBP21.94■■□□□ 1.1
SNX1-206ENST00000559389 TEX44Q53QW1 395 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 DARS2Q6PI48 645 aaKnown RBP21.94■■□□□ 1.1
SNX1-206ENST00000559389 NCEH1Q6PIU2 408 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 GDPD4Q6W3E5 623 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 KBTBD6Q86V97 674 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 ACTRT1Q8TDG2 376 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 GAB3Q8WWW8 586 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 PPP1R16AQ96I34 528 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 MS4A14Q96JA4 679 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 SPACA7Q96KW9 195 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 C16orf45Q96MC5 204 aaPredicted RBP21.94■■□□□ 1.1
SNX1-206ENST00000559389 NSMCE3Q96MG7 304 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 VAT1Q99536 393 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 SEMA3CQ99985 751 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 SCUBE2Q9NQ36 999 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 FBXL12Q9NXK8 326 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 DNPEPQ9ULA0 475 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 FZD4Q9ULV1 537 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 CYP8B1Q9UNU6 501 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 HCN4Q9Y3Q4 1203 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 TTLL3Q9Y4R7 772 aa21.94■■□□□ 1.1
SNX1-206ENST00000559389 TTC24A2A3L6 582 aaPredicted RBP21.93■■□□□ 1.1
SNX1-206ENST00000559389 BYSLQ13895 437 aaKnown RBP21.93■■□□□ 1.1
SNX1-206ENST00000559389 OASLQ15646 514 aaKnown RBP21.93■■□□□ 1.1
SNX1-206ENST00000559389 ZNF805Q5CZA5 627 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 HDDC3Q8N4P3 179 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 ARRDC2Q8TBH0 407 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 C1orf54Q8WWF1 131 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 TEKT5Q96M29 485 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 AGAP3Q96P47 875 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 ATP13A3Q9H7F0 1226 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 NOD2Q9HC29 1040 aa21.93■■□□□ 1.1
SNX1-206ENST00000559389 ANKRD36A6QL64 1941 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 TSPAN11A1L157 253 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 CFAP69A5D8W1 941 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 ZNF185O15231 689 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 KCNN4O15554 427 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 SOCS5O75159 536 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 RNASEH2AO75792 299 aaKnown RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 RPP40O75818 363 aaKnown RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 SERPINA4P29622 427 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 CNR2P34972 360 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 NIPAL4Q0D2K0 466 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 CNTN1Q12860 1018 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 SFSWAPQ12872 951 aaKnown RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 SRSF5Q13243 272 aaKnown RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 FAM182AQ5T1J6 154 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 AGBL4Q5VU57 503 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 SYT10Q6XYQ8 523 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 PARS2Q7L3T8 475 aaKnown RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 ZNF567Q8N184 647 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 FAM160A2Q8N612 972 aaPredicted RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 FRMD1Q8N878 549 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 ZNF641Q96N77 438 aaPredicted RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 KLHL32Q96NJ5 620 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 NAP1L3Q99457 506 aaPredicted RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 OMDQ99983 421 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 FERMT1Q9BQL6 677 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 USP29Q9HBJ7 922 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 DYRK4Q9NR20 520 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 SMARCAL1Q9NZC9 954 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 KLHL8Q9P2G9 620 aaPredicted RBP21.92■■□□□ 1.1
SNX1-206ENST00000559389 DKK3Q9UBP4 350 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 SAR1BQ9Y6B6 198 aa21.92■■□□□ 1.1
SNX1-206ENST00000559389 PLK4O00444 970 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 SLC7A4O43246 635 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 HRO43593 1189 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 BCKDHBP21953 392 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 CES1P23141 567 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 CD6P30203 668 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 OXTRP30559 389 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 NEK3P51956 506 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 BCL2L1Q07817 233 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 ITKQ08881 620 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 CCNG2Q16589 344 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 PIP5KL1Q5T9C9 394 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 DRICH1Q6PGQ1 229 aaPredicted RBP21.91■■□□□ 1.1
SNX1-206ENST00000559389 ZC3H14Q6PJT7 736 aaKnown RBP21.91■■□□□ 1.1
SNX1-206ENST00000559389 CAMK1DQ8IU85 385 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 PRELID2Q8N945 189 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 GANCQ8TET4 914 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 ECHDC3Q96DC8 303 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 TMEM121Q9BTD3 319 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 HDAC8Q9BY41 377 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 IRF2BPLQ9H1B7 796 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 GLOD4Q9HC38 313 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 MBD1Q9UIS9 605 aaPredicted RBP21.91■■□□□ 1.1
SNX1-206ENST00000559389 TRHDEQ9UKU6 1024 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 INVSQ9Y283 1065 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms