RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNX1-205ENST00000559339 MFHAS1Q9Y4C4 1052 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 DCHS1Q96JQ0 3298 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 SPAG17Q6Q759 2223 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 DMXL1Q9Y485 3027 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 A0A1B0GVT2 93 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 A0A1W2PQ67 120 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 A0A1W2PQU0 124 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 C16orf96A6NNT2 1141 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TMEM110-MUSTN1A8MSY1 372 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 UPK3BL1B0FP48 263 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 UPK3BL2E5RIL1 263 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 J3KR12 359 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TLR4O00206 839 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 PLK4O00444 970 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TM4SF5O14894 197 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 FLRT2O43155 660 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 AP1G1O43747 822 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SPOPO43791 374 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ZNF821O75541 412 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 KCNK5O95279 499 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 CD160O95971 181 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 UGT2B4P06133 528 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ZNF883P0CG24 379 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 KRT10P13645 584 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ZFXP17010 805 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 HNRNPA2B1P22626 353 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 IL1R2P27930 398 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 GJC1P36383 396 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 CCT8P50990 548 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SCNN1BP51168 640 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SUOXP51687 545 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ZNF75DP51815 510 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 METAP1P53582 386 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 NAP1L1P55209 391 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 SLC25A11Q02978 314 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 BCL2L1Q07817 233 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ELP6Q0PNE2 266 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TBX2Q13207 712 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 DPYSQ14117 519 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ZNF235Q14590 738 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 MESDQ14696 234 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 LBRQ14739 615 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 ARTNQ5T4W7 220 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ATXN7L2Q5T6C5 722 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 PIP5KL1Q5T9C9 394 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 MARC1Q5VT66 337 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 LRRC38Q5VT99 294 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 NAPEPLDQ6IQ20 393 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TIGD7Q6NT04 549 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 BRAT1Q6PJG6 821 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 CYP4V2Q6ZWL3 525 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 BZW1Q7L1Q6 419 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 HORMAD1Q86X24 394 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 VSIG1Q86XK7 387 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 DCP2Q8IU60 420 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 NDUFAF2Q8N183 169 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 NPWQ8N729 165 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TC2NQ8N9U0 490 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 MFSD2AQ8NA29 543 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 TSEN2Q8NCE0 465 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 CHST14Q8NCH0 376 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 C1orf216Q8TAB5 229 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 HCAR2Q8TDS4 363 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 CXorf40AQ8TE69 158 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SETD7Q8WTS6 366 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 FAM131CQ96AQ9 280 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 KLHDC7BQ96G42 594 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SLC6A18Q96N87 628 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 KLHL32Q96NJ5 620 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ELF4Q99607 663 aaPredicted RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 CDC6Q99741 560 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 PACSIN1Q9BY11 444 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SLC17A9Q9BYT1 436 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 RBSNQ9H1K0 784 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 NOL6Q9H6R4 1146 aaKnown RBP4.43□□□□□ -1.7
SNX1-205ENST00000559339 PCDH18Q9HCL0 1135 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 FSCN3Q9NQT6 498 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 IMPACTQ9P2X3 320 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 DKK3Q9UBP4 350 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 PCDHGB2Q9Y5G2 931 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 FADS3Q9Y5Q0 445 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 SNX11Q9Y5W9 270 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 ACTL7AQ9Y615 435 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 WASF2Q9Y6W5 498 aa4.43□□□□□ -1.7
SNX1-205ENST00000559339 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 A0A0A6YYK5 440 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 LRRD1A4D1F6 860 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 NEMP2A6NFY4 417 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 A6NNZ2 444 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TOR1BO14657 336 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 FPGTO14772 594 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 APOL1O14791 398 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 SLC31A1O15431 190 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 NRDCO43847 1150 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PCDHGA12O60330 932 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 MAFKO60675 156 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 SOCS5O75159 536 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms