RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 NKD2Q969F2 451 aaPredicted RBP11.58□□□□□ -0.56
SNX1-204ENST00000559061 SPACA7Q96KW9 195 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 QKIQ96PU8 341 aaKnown RBP eCLIP11.58□□□□□ -0.566e-10■■□□□ 13.4
SNX1-204ENST00000559061 GORASP1Q9BQQ3 440 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 CINPQ9BW66 212 aaPredicted RBP11.58□□□□□ -0.56
SNX1-204ENST00000559061 HDAC8Q9BY41 377 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 CPEB1Q9BZB8 566 aaKnown RBP11.58□□□□□ -0.56
SNX1-204ENST00000559061 SMOC1Q9H4F8 434 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 NOD2Q9HC29 1040 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 SEPT3Q9UH03 358 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 SCML1Q9UN30 329 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 ITM2BQ9Y287 266 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 EFR3BQ9Y2G0 817 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 ATP8A1Q9Y2Q0 1164 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNX1-204ENST00000559061 RALGAPA1Q6GYQ0 2036 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 ADAMTS9Q9P2N4 1935 aa11.58□□□□□ -0.56
SNX1-204ENST00000559061 C16orf96A6NNT2 1141 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 C1QTNF3-AMACRE9PGA6 284 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 APOC4-APOC2K7ER74 178 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 KPNA3O00505 521 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 WNT9AO14904 365 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 AREL1O15033 823 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 HTRA2O43464 458 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 RNASEH1O60930 286 aaKnown RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 POP4O95707 220 aaKnown RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 SEMA4FO95754 770 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 APOC2P02655 101 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 ACADMP11310 421 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 CCNB1P14635 433 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 TIMP2P16035 220 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 ZFXP17010 805 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 ITPKAP23677 461 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 PTPN3P26045 913 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 MAOBP27338 520 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 CD68P34810 354 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 OTUD4Q01804 1114 aaKnown RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 DSC2Q02487 901 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNX1-204ENST00000559061 TFDP2Q14188 446 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 FGL2Q14314 439 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 PTPRRQ15256 657 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 TTC31Q49AM3 519 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 ZNF805Q5CZA5 627 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 LAIR1Q6GTX8 287 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 GDPD4Q6W3E5 623 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 ERN2Q76MJ5 926 aaKnown RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 DSG4Q86SJ6 1040 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 ACTL9Q8TC94 416 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 TADA1Q96BN2 335 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 BIRC7Q96CA5 298 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 HSPA12BQ96MM6 686 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 KLHL32Q96NJ5 620 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 SMIM14Q96QK8 99 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 NUDCD1Q96RS6 583 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 SEMA4AQ9H3S1 761 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 NT5MQ9NPB1 228 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 ZFR2Q9UPR6 939 aaKnown RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.57□□□□□ -0.56
SNX1-204ENST00000559061 GON4LQ3T8J9 2241 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 TMEM131Q92545 1883 aa11.57□□□□□ -0.56
SNX1-204ENST00000559061 SCN8AQ9UQD0 1980 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 ZFHX2Q9C0A1 2572 aaPredicted RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 WDR87Q6ZQQ6 2873 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 BCLAF3A2AJT9 711 aaKnown RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 METTL12A8MUP2 240 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 PATE3B3GLJ2 98 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 ENC1O14682 589 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 SLC7A4O43246 635 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 PRLP01236 227 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 JCHAINP01591 159 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 PRKCGP05129 697 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 ADRB3P13945 408 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 GM2AP17900 193 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 MX2P20592 715 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 OXTRP30559 389 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 RECQLP46063 649 aaPredicted RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 NR2C2P49116 596 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 PDK1Q15118 436 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 MARC1Q5VT66 337 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 FAM46CQ5VWP2 391 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 TCEAL6Q6IPX3 200 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 TIGD7Q6NT04 549 aaPredicted RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 SLC36A4Q6YBV0 504 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 LPCAT2Q7L5N7 544 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 ZC3H18Q86VM9 953 aaKnown RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 SLC35F6Q8N357 371 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 RYBPQ8N488 228 aaPredicted RBP11.56□□□□□ -0.56
SNX1-204ENST00000559061 UBL4BQ8N7F7 174 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 CADM4Q8NFZ8 388 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 DNASE2BQ8WZ79 361 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 TCEAL3Q969E4 200 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 LRIG1Q96JA1 1093 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 CCDC114Q96M63 670 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 OMDQ99983 421 aa11.56□□□□□ -0.56
SNX1-204ENST00000559061 MAK16Q9BXY0 300 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms