RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PNMA8BQ9ULN7 279 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-207ENST00000558936 NCKAP1Q9Y2A7 1128 aa12.82□□□□□ -0.36
RABGGTA-207ENST00000558936 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-207ENST00000558936 SNX11Q9Y5W9 270 aa12.82□□□□□ -0.36
RABGGTA-207ENST00000558936 A0A0U1RQS6 177 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 A0A1B0GTW7 788 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 TSPAN11A1L157 253 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 H3BRJ5 948 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 PJA2O43164 708 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 SLC7A4O43246 635 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 ADRB3P13945 408 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 PRLRP16471 622 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 ARHGAP25P42331 645 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 MAPK8P45983 427 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 CCR5P51681 352 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 IL10RBQ08334 325 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 GALNT2Q10471 571 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 SLC9A4Q6AI14 798 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 MFSD7Q6UXD7 560 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 DBX2Q6ZNG2 339 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 RABEPKQ7Z6M1 372 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 PIP4P1Q86T03 277 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 TRIM69Q86WT6 500 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 CAMK1DQ8IU85 385 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 CCDC170Q8IYT3 715 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 MINDY1Q8N5J2 469 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 TEX26Q8N6G2 289 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 LRRC57Q8N9N7 239 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 GANCQ8TET4 914 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 BMFQ96LC9 184 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 CAMK1GQ96NX5 476 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 RNF157Q96PX1 679 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 DTLQ9NZJ0 730 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 UBA2Q9UBT2 640 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 SUSD2Q9UGT4 822 aa12.81□□□□□ -0.36
RABGGTA-207ENST00000558936 LRP4O75096 1905 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3DA0A087WVF3 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3IA0A087WXS9 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3EA0A087X179 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3KA0A087X1G2 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 A0A1W2PQU0 124 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3FA6NER0 549 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3LB9A6J9 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 KRIT1O00522 736 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 RNGTTO60942 597 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 PRNPP04156 253 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3HP0C7X1 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 CTSKP43235 329 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 NOP2P46087 812 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 MAXP61244 160 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 RALGDSQ12967 914 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 ZNF805Q5CZA5 627 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3GQ6DHY5 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3CQ6IPX1 549 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 AADACL2Q6P093 401 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 KANSL1Q7Z3B3 1105 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 DSG4Q86SJ6 1040 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 RHOT2Q8IXI1 618 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 TBC1D3Q8IZP1 549 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 SLC22A18ASQ8N1D0 253 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 PELI3Q8N2H9 469 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 CNTD1Q8N815 330 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 SNX19Q92543 992 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 MAML1Q92585 1016 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 ECHDC3Q96DC8 303 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 PSKH2Q96QS6 385 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 NCAPGQ9BPX3 1015 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 ZNF670Q9BS34 389 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 CPEB1Q9BZB8 566 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 GPR27Q9NS67 375 aa12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 RCOR3Q9P2K3 495 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 SAE1Q9UBE0 346 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-207ENST00000558936 A0A0A6YYK5 440 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 ARHGAP42A6NI28 874 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 C1QTNF3-AMACRE9PGA6 284 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 DAPK3O43293 454 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 CBFA2T3O75081 653 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 MMP2P08253 660 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 TPM1P09493 284 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 KRT10P13645 584 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 GNSP15586 552 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 PECAM1P16284 738 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 DESP17661 470 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 GARSP41250 739 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 CDKN2BP42772 138 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 SSR1P43307 286 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 PEX5P50542 639 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 ZNF135P52742 658 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 CLDN2P57739 230 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 RHOAP61586 193 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 NIPAL4Q0D2K0 466 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms