RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 C18orf25Q96B23 403 aaPredicted RBP10.38□□□□□ -0.75
MARK3-213ENST00000558611 NUDT11Q96G61 164 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 AJUBAQ96IF1 538 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 ENKD1Q9H0I2 346 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 BLZF1Q9H2G9 400 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 GOLPH3LQ9H4A5 285 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 RPF1Q9H9Y2 349 aaKnown RBP10.38□□□□□ -0.75
MARK3-213ENST00000558611 TBC1D23Q9NUY8 699 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 BCCIPQ9P287 314 aaKnown RBP eCLIP10.38□□□□□ -0.75
MARK3-213ENST00000558611 CPSF3Q9UKF6 684 aaKnown RBP10.38□□□□□ -0.75
MARK3-213ENST00000558611 AGO2Q9UKV8 859 aaKnown RBP10.38□□□□□ -0.75
MARK3-213ENST00000558611 DENND4CQ5VZ89 1909 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 NOTCH4Q99466 2003 aa10.38□□□□□ -0.75
MARK3-213ENST00000558611 UBE4BO95155 1302 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 ITIH6Q6UXX5 1313 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 PVALEFA0A1B0GWK0 134 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 LACTBL1A8MY62 500 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 EIF3DO15371 548 aaKnown RBP eCLIP10.37□□□□□ -0.75
MARK3-213ENST00000558611 B3GAT3O94766 335 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 INMTO95050 263 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 UNC5CO95185 931 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 IGHA1P01876 353 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 EPCAMP16422 314 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 RPL9P32969 192 aaKnown RBP10.37□□□□□ -0.75
MARK3-213ENST00000558611 CASRP41180 1078 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 ACOT2P49753 483 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 CLCN4P51793 760 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 MPP1Q00013 466 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 EFR3AQ14156 821 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 KCNMB1Q16558 191 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 AGBL4Q5VU57 503 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 DCAF12L1Q5VU92 463 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 CD300LGQ6UXG3 332 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 KRT73Q86Y46 540 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 CD302Q8IX05 232 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 MPP5Q8N3R9 675 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 SLC15A4Q8N697 577 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 SLC22A17Q8WUG5 538 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 PAGE5Q96GU1 130 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 KLHL5Q96PQ7 755 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 TSPAN18Q96SJ8 248 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 MYOCQ99972 504 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 NDC1Q9BTX1 674 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 MRI1Q9BV20 369 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 TMEM206Q9H813 350 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 WASH6PQ9NQA3 447 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.37□□□□□ -0.75
MARK3-213ENST00000558611 TUBGCP4Q9UGJ1 667 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 PTPRDP23468 1912 aa10.37□□□□□ -0.75
MARK3-213ENST00000558611 OBSL1O75147 1896 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 MYH10P35580 1976 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 MYO1CO00159 1063 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 TEX28O15482 410 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 KLRC4O43908 158 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 GRPP07492 148 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 HOXB8P17481 243 aaPredicted RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 CYP3A5P20815 502 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 KLRC2P26717 231 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 LRPAP1P30533 357 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 ANP32AP39687 249 aaKnown RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 BPIFB4P59827 614 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 POU5F1Q01860 360 aaKnown RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 SPAG1Q07617 926 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 ZBTB6Q15916 424 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 FAM171A1Q5VUB5 890 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 LIN54Q6MZP7 749 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 SYCE2Q6PIF2 218 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 PRSS55Q6UWB4 352 aaPredicted RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 CRELD2Q6UXH1 353 aaPredicted RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 KRBA2Q6ZNG9 492 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 OR5M3Q8NGP4 307 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 TTPALQ9BTX7 342 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 CNPPD1Q9BV87 410 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 PCMTD2Q9NV79 361 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 MID2Q9UJV3 735 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 SLC13A4Q9UKG4 626 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 UBQLN1Q9UMX0 589 aaKnown RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 DERAQ9Y315 318 aa10.36□□□□□ -0.75
MARK3-213ENST00000558611 USP15Q9Y4E8 981 aaPredicted RBP10.36□□□□□ -0.75
MARK3-213ENST00000558611 TMEM233B4DJY2 109 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 I3L4J1 428 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 PIP5K1BO14986 540 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 KIAA0391O15091 583 aaKnown RBP10.35□□□□□ -0.75
MARK3-213ENST00000558611 PJA2O43164 708 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 TRAPPC3O43617 180 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 SNX2O60749 519 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 TKTP29401 623 aaKnown RBP10.35□□□□□ -0.75
MARK3-213ENST00000558611 HOXD13P35453 343 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 BRCC3P46736 316 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 GZMKP49863 264 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 UCP3P55916 312 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 TMEM132DQ14C87 1099 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 PSMD5Q16401 504 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 TIGD6Q17RP2 521 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 BMT2Q1RMZ1 405 aa10.35□□□□□ -0.75
MARK3-213ENST00000558611 JADE1Q6IE81 842 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms