RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 NEK3P51956 506 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TFDP2Q14188 446 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 CSRP2Q16527 193 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 ZNF805Q5CZA5 627 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PIP5KL1Q5T9C9 394 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PEAR1Q5VY43 1037 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3GQ6DHY5 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3CQ6IPX1 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 FBXL19Q6PCT2 694 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 NPNTQ6UXI9 565 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 GDPD4Q6W3E5 623 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PARS2Q7L3T8 475 aaKnown RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PEX26Q7Z412 305 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 NT5DC3Q86UY8 548 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3Q8IZP1 549 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 EXD1Q8NHP7 514 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 DNASE2BQ8WZ79 361 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 BIRC7Q96CA5 298 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 KLHL32Q96NJ5 620 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PSKH2Q96QS6 385 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 HDAC8Q9BY41 377 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 EIF2B4Q9UI10 523 aaKnown RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 CAPN6Q9Y6Q1 641 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 ADAMTS9Q9P2N4 1935 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 hCG_1818297A0A087WSY0 165 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 PATE3B3GLJ2 98 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 MUSKO15146 869 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 CST8O60676 142 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 FTCDO95954 541 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 CFIP05156 583 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 ADRB3P13945 408 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 GNSP15586 552 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 CCNCP24863 283 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 HOXD12P35452 270 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 HSPA9P38646 679 aaKnown RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 MMP13P45452 471 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 CSNK1DP48730 415 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 SCNN1BP51168 640 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 RWDD2BP57060 319 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 NSUN2Q08J23 767 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 GRM3Q14832 879 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 SF3A2Q15428 464 aaKnown RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 TAZQ16635 292 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 DUOXA1Q1HG43 343 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 TCEAL6Q6IPX3 200 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 PRR23CQ6ZRP0 262 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 SRLQ86TD4 932 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 CEP76Q8TAP6 659 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 TCEAL3Q969E4 200 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 VOPP1Q96AW1 172 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 HDAC11Q96DB2 347 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 TSGA13Q96PP4 275 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 CPEB1Q9BZB8 566 aaKnown RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 PREBQ9HCU5 417 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 PACSIN2Q9UNF0 486 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
SMAD3-205ENST00000558428 PLXNA2O75051 1894 aa12.51□□□□□ -0.41
SMAD3-205ENST00000558428 PPP1R12AO14974 1030 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 MATN3O15232 486 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 FOXD2O60548 495 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 NEBLO76041 1014 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 MAPK8P45983 427 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PEX5P50542 639 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 CCR5P51681 352 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 TAS2R38P59533 333 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 COPS2P61201 443 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 MAXP61244 160 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 AP1S1P61966 158 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PPP2CBP62714 309 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PPP2CAP67775 309 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 GSE1Q14687 1217 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PDK1Q15118 436 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PPP2R5EQ16537 467 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 BZW1Q7L1Q6 419 aaKnown RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PGBD5Q8N414 524 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 UBL4BQ8N7F7 174 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms