RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
HERC1-202ENST00000558324 NCAPGQ9BPX3 1015 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
HERC1-202ENST00000558324 OSBPL1AQ9BXW6 950 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 EDEM3Q9BZQ6 932 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 LHX3Q9UBR4 397 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 UBA2Q9UBT2 640 aaPredicted RBP12.09□□□□□ -0.47
HERC1-202ENST00000558324 SCINQ9Y6U3 715 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 USP24Q9UPU5 2620 aa12.09□□□□□ -0.47
HERC1-202ENST00000558324 ZFHX4Q86UP3 3567 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 POM121BA6NF01 834 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
HERC1-202ENST00000558324 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 J3KR12 359 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 TSPAN6O43657 245 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 AP1G1O43747 822 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 LRCH4O75427 683 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 RFPL3O75679 317 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 PIGNO95427 931 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 ITIH2P19823 946 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 ACADVLP49748 655 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 UBASH3AP57075 661 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 RAD51Q06609 339 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 SGCGQ13326 291 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 CYTH1Q15438 398 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 RFX8Q6ZV50 586 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 ABI3BPQ7Z7G0 1075 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 TTC7BQ86TV6 843 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 GALNT15Q8N3T1 639 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 CASKIN2Q8WXE0 1202 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 RAB7BQ96AH8 199 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 TRIM11Q96F44 468 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 BMFQ96LC9 184 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 WRAP53Q9BUR4 548 aaKnown RBP12.08□□□□□ -0.48
HERC1-202ENST00000558324 SLC39A8Q9C0K1 460 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 LRRC19Q9H756 370 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 KLHL11Q9NVR0 708 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 DNAJC28Q9NX36 388 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 RALYQ9UKM9 306 aaKnown RBP12.08□□□□□ -0.48
HERC1-202ENST00000558324 WDFY3Q8IZQ1 3526 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
HERC1-202ENST00000558324 AKAP13Q12802 2813 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 COL5A1P20908 1838 aaPredicted RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 DFFAO00273 331 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 TRIM38O00635 465 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 FPGTO14772 594 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 MMP20O60882 483 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 MYBL1P10243 752 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 TCF4P15884 667 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 ERCC2P18074 760 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 XPAP23025 273 aaPredicted RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 DGKAP23743 735 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 HTR7P34969 479 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 PAPOLAP51003 745 aaKnown RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 NDST2P52849 883 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 SMTNL2Q2TAL5 461 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 INO80DQ53TQ3 878 aaPredicted RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 FIGNQ5HY92 759 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 CFAP58Q5T655 872 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 HGSNATQ68CP4 663 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 KYAT3Q6YP21 454 aaKnown RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 ARHGAP36Q6ZRI8 547 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 CYP4V2Q6ZWL3 525 aaPredicted RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 VPS36Q86VN1 386 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 SLC25A45Q8N413 288 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 NPWQ8N729 165 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 FNIP1Q8TF40 1166 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 HSPH1Q92598 858 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 ARHGEF26Q96DR7 871 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 CCDC86Q9H6F5 360 aaKnown RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 ZWILCHQ9H900 591 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 SP110Q9HB58 689 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 PDFQ9HBH1 243 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 DONSONQ9NYP3 566 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 IFNKQ9P0W0 207 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
HERC1-202ENST00000558324 MFHAS1Q9Y4C4 1052 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 CHD5Q8TDI0 1954 aa12.07□□□□□ -0.48
HERC1-202ENST00000558324 KNL1Q8NG31 2342 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 DOCK9Q9BZ29 2069 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 A0A1W2PQJ5 194 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
HERC1-202ENST00000558324 AREL1O15033 823 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 PRAMEF11O60813 436 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 PIAS2O75928 621 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 TIMP2P16035 220 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 CKMT2P17540 419 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 PBX1P40424 430 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 RGRP47804 291 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 DAB2P98082 770 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 SEMG2Q02383 582 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 PDE1CQ14123 709 aaPredicted RBP12.06□□□□□ -0.48
HERC1-202ENST00000558324 FZD2Q14332 565 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 NFKBIBQ15653 356 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms