RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 HAUS2Q9NVX0 235 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 AMACRQ9UHK6 382 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 SMG5Q9UPR3 1016 aaKnown RBP25.87■■□□□ 1.73
SMAD6-202ENST00000557916 VPS13AQ96RL7 3174 aa25.87■■□□□ 1.73
SMAD6-202ENST00000557916 PLXND1Q9Y4D7 1925 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 TTC24A2A3L6 582 aaPredicted RBP25.86■■□□□ 1.73
SMAD6-202ENST00000557916 HACD1B0YJ81 288 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 GJB3O75712 270 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 RHOBTB1O94844 696 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 CR2P20023 1033 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 MAPK8P45983 427 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 AP1S1P61966 158 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 CCDC15Q0P6D6 951 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 KLF1Q13351 362 aaPredicted RBP25.86■■□□□ 1.73
SMAD6-202ENST00000557916 XRCC4Q13426 336 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 PMS2CLQ68D20 193 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 ERN2Q76MJ5 926 aaKnown RBP25.86■■□□□ 1.73
SMAD6-202ENST00000557916 TMEFF1Q8IYR6 380 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 SUMF1Q8NBK3 374 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 FAM131CQ96AQ9 280 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 NUDCD1Q96RS6 583 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 TUBGCP5Q96RT8 1024 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 PHOX2BQ99453 314 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 IL12RB2Q99665 862 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 HDAC8Q9BY41 377 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 POLR1EQ9GZS1 481 aaKnown RBP25.86■■□□□ 1.73
SMAD6-202ENST00000557916 SCUBE2Q9NQ36 999 aa25.86■■□□□ 1.73
SMAD6-202ENST00000557916 PROB1E7EW31 1015 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 H7C0C1 242 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 PIGNO95427 931 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 ATP5OP48047 213 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 ZBTB17Q13105 803 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 AGBL4Q5VU57 503 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 CAMK1DQ8IU85 385 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 DEFB119Q8N690 84 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 TTC13Q8NBP0 860 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 OR14C36Q8NHC7 312 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 NKD2Q969F2 451 aaPredicted RBP25.85■■□□□ 1.73
SMAD6-202ENST00000557916 QKIQ96PU8 341 aaKnown RBP eCLIP25.85■■□□□ 1.73
SMAD6-202ENST00000557916 FAM118BQ9BPY3 351 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 ATP13A3Q9H7F0 1226 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 TTLL3Q9Y4R7 772 aa25.85■■□□□ 1.73
SMAD6-202ENST00000557916 TCRBV7S2A1N4TA0A589 114 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 C16orf96A6NNT2 1141 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 SLC7A4O43246 635 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 SEMA4FO95754 770 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 HLA-DQB2P05538 268 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 EIF3EP60228 445 aaKnown RBP25.84■■□□□ 1.73
SMAD6-202ENST00000557916 BCL2L1Q07817 233 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 SLC45A4Q5BKX6 768 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 RALGPS1Q5JS13 557 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 SPDYCQ5MJ68 293 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 NCEH1Q6PIU2 408 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 SLC13A5Q86YT5 568 aaPredicted RBP25.84■■□□□ 1.73
SMAD6-202ENST00000557916 ZNF641Q96N77 438 aaPredicted RBP25.84■■□□□ 1.73
SMAD6-202ENST00000557916 CEP41Q9BYV8 373 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 SUV39H2Q9H5I1 410 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 NOD2Q9HC29 1040 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 DMDP11532 3685 aa25.84■■□□□ 1.73
SMAD6-202ENST00000557916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.83■■□□□ 1.73
SMAD6-202ENST00000557916 LMNAP02545 664 aaKnown RBP25.83■■□□□ 1.73
SMAD6-202ENST00000557916 SERPINA4P29622 427 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 NEK3P51956 506 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 ADPRHP54922 357 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 PIP5KL1Q5T9C9 394 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 FBXL19Q6PCT2 694 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 PARS2Q7L3T8 475 aaKnown RBP25.83■■□□□ 1.73
SMAD6-202ENST00000557916 CNTD1Q8N815 330 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 CADM4Q8NFZ8 388 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 NSMCE3Q96MG7 304 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 SEMA3CQ99985 751 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 KCND1Q9NSA2 647 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 ATP8A1Q9Y2Q0 1164 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 ABCA7Q8IZY2 2146 aa25.83■■□□□ 1.73
SMAD6-202ENST00000557916 MYO15AQ9UKN7 3530 aa25.83■■□□□ 1.72
SMAD6-202ENST00000557916 FAM47DPA6NHR8 397 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 LRRC72A6NJI9 287 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 MTSS1O43312 755 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 PLRG1O43660 514 aaKnown RBP25.82■■□□□ 1.72
SMAD6-202ENST00000557916 RBP3P10745 1247 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 CES1P23141 567 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 CXCR5P32302 372 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 DHPSP49366 369 aaPredicted RBP25.82■■□□□ 1.72
SMAD6-202ENST00000557916 FAM182AQ5T1J6 154 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 ALG1LQ6GMV1 187 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.82■■□□□ 1.72
SMAD6-202ENST00000557916 HTR3CQ8WXA8 447 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 C6orf106Q9H6K1 298 aaPredicted RBP25.82■■□□□ 1.72
SMAD6-202ENST00000557916 DKK3Q9UBP4 350 aa25.82■■□□□ 1.72
SMAD6-202ENST00000557916 CEP104O60308 925 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 ATP1A1P05023 1023 aaKnown RBP25.81■■□□□ 1.72
SMAD6-202ENST00000557916 ADRB3P13945 408 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 PTPN3P26045 913 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 PTGER3P43115 390 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 GNG11P61952 73 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 DSC2Q02487 901 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 TEX44Q53QW1 395 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 CFAP58Q5T655 872 aa25.81■■□□□ 1.72
SMAD6-202ENST00000557916 LAIR1Q6GTX8 287 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms