RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 CLDND1Q9NY35 253 aa6.12□□□□□ -1.43
FOXN3-218ENST00000557718 DDX56Q9NY93 547 aaKnown RBP6.12□□□□□ -1.43
FOXN3-218ENST00000557718 STOML2Q9UJZ1 356 aa6.12□□□□□ -1.43
FOXN3-218ENST00000557718 TTC7AQ9ULT0 858 aaPredicted RBP6.12□□□□□ -1.43
FOXN3-218ENST00000557718 ARHGAP26Q9UNA1 814 aa6.12□□□□□ -1.43
FOXN3-218ENST00000557718 POLR3KQ9Y2Y1 108 aaPredicted RBP6.12□□□□□ -1.43
FOXN3-218ENST00000557718 MRPS23Q9Y3D9 190 aaKnown RBP6.12□□□□□ -1.43
FOXN3-218ENST00000557718 ZNF106Q9H2Y7 1883 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 IGLV3-10A0A075B6K4 115 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 TRAV19A0A0A6YYK7 116 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ZNF487B1APH4 448 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 LEFTY2O00292 366 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 PRRG2O14669 202 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 TRDMT1O14717 391 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 DCLK1O15075 740 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CEP104O60308 925 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ACSL4O60488 711 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 DNAJA2O60884 412 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 SEMA7AO75326 666 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CNTN5O94779 1100 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ZRANB2O95218 330 aaKnown RBP eCLIP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 FGF19O95750 216 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 FGGP02679 453 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CKMP06732 381 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 TCF3P15923 654 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 HOXB8P17481 243 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 PFKLP17858 780 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 TACR2P21452 398 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 DDX6P26196 483 aaKnown RBP eCLIP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CORO1AP31146 461 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CCR1P32246 355 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 GBP1P32455 592 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 AIF1P55008 147 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 VCPP55072 806 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 MLLT6P55198 1093 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CHRNEQ04844 493 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 SLC10A2Q12908 348 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ALFQ53S48 1182 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ANKRD20A8PQ5CZ79 823 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 PPP6R3Q5H9R7 873 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 FAM78AQ5JUQ0 283 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 RAP1GAP2Q684P5 730 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NCBP2-AS2Q69YL0 99 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 FBXL22Q6P050 247 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 TTC27Q6P3X3 843 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 RFWD3Q6PCD5 774 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NPNTQ6UXI9 565 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 BBS12Q6ZW61 710 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 HTR3DQ70Z44 454 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 GET4Q7L5D6 327 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NLRP14Q86W24 1093 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CIR1Q86X95 450 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 DENND1CQ8IV53 801 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ARID3BQ8IVW6 561 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ARHGAP12Q8IWW6 846 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 BBS7Q8IWZ6 715 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 RCOR2Q8IZ40 523 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NPWQ8N729 165 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ANKS4BQ8N8V4 417 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 PRELID2Q8N945 189 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NOA1Q8NC60 698 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 SMRP1Q8NCR6 262 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 OR52K2Q8NGK3 314 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 SH3RF2Q8TEC5 729 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 FGF13Q92913 245 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 PPP2R3CQ969Q6 453 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 AZIN2Q96A70 460 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CRELD1Q96HD1 420 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 RBM41Q96IZ5 413 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 BTN2A3PQ96KV6 586 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 TMEM74Q96NL1 305 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 RNF157Q96PX1 679 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 GCNAQ96QF7 691 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 HAPLN3Q96S86 360 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CDK5RAP1Q96SZ6 601 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 FAM118BQ9BPY3 351 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ZNF670Q9BS34 389 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CARD6Q9BX69 1037 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 PLA2G2FQ9BZM2 168 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ZNF552Q9H707 407 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 RBM12Q9NTZ6 932 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 CFAP97Q9P2B7 532 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 SAE1Q9UBE0 346 aaPredicted RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 OR12D3Q9UGF7 316 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 DPP7Q9UHL4 492 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 GPR160Q9UJ42 338 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 AGO1Q9UL18 857 aaKnown RBP6.11□□□□□ -1.43
FOXN3-218ENST00000557718 VANGL2Q9ULK5 521 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 ZNF281Q9Y2X9 895 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 EML5Q05BV3 1969 aa6.11□□□□□ -1.43
FOXN3-218ENST00000557718 BDP1A6H8Y1 2624 aa6.1□□□□□ -1.43
FOXN3-218ENST00000557718 CEP192Q8TEP8 1941 aa6.1□□□□□ -1.43
FOXN3-218ENST00000557718 DRGXA6NNA5 263 aa6.1□□□□□ -1.43
FOXN3-218ENST00000557718 B8ZZF3 427 aa6.1□□□□□ -1.43
FOXN3-218ENST00000557718 E9PAM4 449 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms