RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 USP6NLQ92738 828 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 ATOH1Q92858 354 aaPredicted RBP4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 COQ8BQ96D53 544 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 MSI2Q96DH6 328 aaKnown RBP4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 PIP5K1AQ99755 562 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 ITPAQ9BY32 194 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 MUC13Q9H3R2 512 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 TASP1Q9H6P5 420 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 WDR6Q9NNW5 1121 aaKnown RBP4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 NRIP3Q9NQ35 241 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 SPATS2LQ9NUQ6 558 aaKnown RBP4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 ZMYM2Q9UBW7 1377 aa4.59□□□□□ -1.67
EFCAB11-213ENST00000557685 RSF1Q96T23 1441 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 A0A0G2JK05 382 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 CGB1A6NKQ9 187 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 ZNF814B7Z6K7 855 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 K7ENM7 598 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 SLC25A17O43808 307 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 DOK2O60496 412 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 PTP4A3O75365 173 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 PCNAP12004 261 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 ENO3P13929 434 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 NFKBIAP25963 317 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 MAPK4P31152 587 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 TTKP33981 857 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 RFC1P35251 1148 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 MLH1P40692 756 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 GNAQP50148 359 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 EFNA5P52803 228 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 PLEKHO1Q53GL0 409 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 TBC1D26Q86UD7 250 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 CAMK1DQ8IU85 385 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.58□□□□□ -1.684e-6■■□□□ 12.7
EFCAB11-213ENST00000557685 FAM217AQ8IXS0 508 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 LRRC57Q8N9N7 239 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 CREB3L4Q8TEY5 395 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 FAM149B1Q96BN6 582 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 INTS12Q96CB8 462 aaKnown RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 RNF183Q96D59 192 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 ZFYVE19Q96K21 471 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 MAP7D2Q96T17 732 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 SDF4Q9BRK5 362 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 GLIS2Q9BZE0 524 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 B3GNT4Q9C0J1 378 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 TMX4Q9H1E5 349 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 EIF2B3Q9NR50 452 aaKnown RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 EHD2Q9NZN4 543 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 MSRB1Q9NZV6 116 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 PTGFRNQ9P2B2 879 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 LIMA1Q9UHB6 759 aaKnown RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 INTS6Q9UL03 887 aaKnown RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 CARD8Q9Y2G2 431 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 LYVE1Q9Y5Y7 322 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 KCNE2Q9Y6J6 123 aa4.58□□□□□ -1.68
EFCAB11-213ENST00000557685 GAGE12JA6NER3 117 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 MASP2O00187 686 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 ATG13O75143 517 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SEC31AO94979 1220 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 KLKB1P03952 638 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 EIF2S1P05198 315 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 MMP3P08254 477 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 CTPS1P17812 591 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 DRG2P55039 364 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 OLR1P78380 273 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SSBP2P81877 361 aaPredicted RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 GAD2Q05329 585 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 MTX1Q13505 466 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 PPP2R5BQ15173 497 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 RNPS1Q15287 305 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 ASPHD1Q5U4P2 390 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SYCE2Q6PIF2 218 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SLC2A7Q6PXP3 512 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 GSTA5Q7RTV2 222 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 DNAJC10Q8IXB1 793 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 KIAA2013Q8IYS2 634 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 HORMAD2Q8N7B1 307 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 PDILTQ8N807 584 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 C16orf52Q8NHV5 167 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 BICD2Q8TD16 824 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 PIGOQ8TEQ8 1089 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 TMEM174Q8WUU8 243 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 ARHGEF2Q92974 986 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SMARCE1Q969G3 411 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 TRMOQ9BU70 441 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 STRA6Q9BX79 667 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 CDT1Q9H211 546 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 GHITMQ9H3K2 345 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 PLEKHA4Q9H4M7 779 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 MVB12BQ9H7P6 319 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SEPT11Q9NVA2 429 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 HCFC1R1Q9NWW0 138 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 SLCO3A1Q9UIG8 710 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 HAO1Q9UJM8 370 aa4.57□□□□□ -1.68
EFCAB11-213ENST00000557685 UTYO14607 1347 aa4.56□□□□□ -1.68
EFCAB11-213ENST00000557685 A0A1W2PPC1 479 aa4.56□□□□□ -1.68
EFCAB11-213ENST00000557685 TYW5A2RUC4 315 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms