RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SGCGQ13326 291 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 MTA1Q13330 715 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 ZSCAN23Q3MJ62 389 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 PRRT3Q5FWE3 981 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 NAA35Q5VZE5 725 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 BNIPLQ7Z465 357 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 NOP9Q86U38 636 aaKnown RBP14.31□□□□□ -0.12
SLIRP-210ENST00000557431 ZDHHC17Q8IUH5 632 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 PHACTR4Q8IZ21 702 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 SLC20A1Q8WUM9 679 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 C1orf74Q96LT6 269 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 C1QTNF2Q9BXJ5 285 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 CEP44Q9C0F1 390 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 CLPBQ9H078 707 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 THSD1Q9NS62 852 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 SIRPGQ9P1W8 387 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 TMEM59LQ9UK28 342 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 SDK2Q58EX2 2172 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 GTPBP10A4D1E9 387 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 AP1G1O43747 822 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 F9P00740 461 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 RBMS1P29558 406 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 SNX16P57768 344 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 NOMO3P69849 1222 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 RHDQ02161 417 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 VAC14Q08AM6 782 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 NR0B2Q15466 257 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 MAN2A1Q16706 1144 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 TPD52L1Q16890 204 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 MIIPQ5JXC2 388 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 RWDD4Q6NW29 188 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 RBM44Q6ZP01 1051 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 B3GNT8Q7Z7M8 397 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 DCP2Q8IU60 420 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 JOSD2Q8TAC2 188 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 ARHGEF2Q92974 986 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 COL26A1Q96A83 441 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 HAPLN3Q96S86 360 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 CCDC3Q9BQI4 270 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 WRAP53Q9BUR4 548 aaKnown RBP14.3□□□□□ -0.12
SLIRP-210ENST00000557431 KLC2Q9H0B6 622 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 EVA1BQ9NVM1 165 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 RABGEF1Q9UJ41 708 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 NEU3Q9UQ49 428 aa14.3□□□□□ -0.12
SLIRP-210ENST00000557431 CFAP46Q8IYW2 2715 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 PES1O00541 588 aaKnown RBP14.29□□□□□ -0.12
SLIRP-210ENST00000557431 INSIG1O15503 277 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 TNFSF15O95150 251 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 HGFP14210 728 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 TSHRP16473 764 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 THOP1P52888 689 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 FAXCQ5TGI0 409 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 MANEALQ5VSG8 457 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 ZNF354CQ86Y25 554 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 CCDC185Q8N715 623 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 GPT2Q8TD30 523 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 CENPTQ96BT3 561 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 EXOC2Q96KP1 924 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 SLC46A1Q96NT5 459 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 BOCQ9BWV1 1114 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 NDST4Q9H3R1 872 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 USP29Q9HBJ7 922 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 SPASTQ9UBP0 616 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 GULP1Q9UBP9 304 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 SALL4Q9UJQ4 1053 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 PAXBP1Q9Y5B6 917 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 CSNK1G3Q9Y6M4 447 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 MYO18BQ8IUG5 2567 aa14.29□□□□□ -0.12
SLIRP-210ENST00000557431 CDRT15L2A8MXV6 281 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 YY2O15391 372 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 TSPAN6O43657 245 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 LZTS3O60299 673 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-210ENST00000557431 KLK7P49862 253 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 UCNP55089 124 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 SKOR1P84550 965 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 SLC20A2Q08357 652 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 CLN3Q13286 438 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 IRF4Q15306 451 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 VWA3BQ502W6 1294 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 C6orf132Q5T0Z8 1188 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 ZNF783Q6ZMS7 281 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 RD3Q7Z3Z2 195 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 NLRP14Q86W24 1093 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 SFTPA2Q8IWL1 248 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 PYROXD2Q8N2H3 581 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 KYQ8NBH2 561 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 TP53I13Q8NBR0 393 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-210ENST00000557431 OR2AP1Q8NGE2 309 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 FAM174AQ8TBP5 190 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 RXFP2Q8WXD0 754 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 TSACCQ96A04 125 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-210ENST00000557431 LENG8Q96PV6 779 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-210ENST00000557431 EPAS1Q99814 870 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 C11orf70Q9BRQ4 267 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms