RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ATP1A3P13637 1013 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 RABIFP47224 123 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 YBEYP58557 167 aaPredicted RBP14.38□□□□□ -0.11
SNX6-210ENST00000557341 HNRNPKP61978 463 aaKnown RBP eCLIP14.38□□□□□ -0.114e-8■□□□□ 11.2
SNX6-210ENST00000557341 TYRO3Q06418 890 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 RAD51Q06609 339 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 SGCGQ13326 291 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 COL28A1Q2UY09 1125 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 PARP15Q460N3 678 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 ATXN7L2Q5T6C5 722 aaPredicted RBP14.38□□□□□ -0.11
SNX6-210ENST00000557341 ACAD10Q6JQN1 1059 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 PARGQ86W56 976 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 RFFLQ8WZ73 363 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 BMFQ96LC9 184 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 KLHL32Q96NJ5 620 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 LENG8Q96PV6 779 aaPredicted RBP14.38□□□□□ -0.11
SNX6-210ENST00000557341 NOL6Q9H6R4 1146 aaKnown RBP14.38□□□□□ -0.11
SNX6-210ENST00000557341 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 FZD10Q9ULW2 581 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 MYO6Q9UM54 1294 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 ITM2BQ9Y287 266 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 NEMP2A6NFY4 417 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 IGLON5A6NGN9 336 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 WASH4PA8MWX3 477 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 H3BM21 787 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 RAD51BO15315 384 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 HTR7P34969 479 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 RHOAP61586 193 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 TARDBPQ13148 414 aaKnown RBP eCLIP14.37□□□□□ -0.11
SNX6-210ENST00000557341 MYLK3Q32MK0 819 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 INO80DQ53TQ3 878 aaPredicted RBP14.37□□□□□ -0.11
SNX6-210ENST00000557341 C19orf48Q6RUI8 117 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 TMC6Q7Z403 805 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 MCOLN2Q8IZK6 566 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 ASB12Q8WXK4 309 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 BAP1Q92560 729 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 HMCESQ96FZ2 354 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
SNX6-210ENST00000557341 DUSP23Q9BVJ7 150 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 C1QTNF2Q9BXJ5 285 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 TTYH3Q9C0H2 523 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 EVA1BQ9NVM1 165 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 DONSONQ9NYP3 566 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 GGT7Q9UJ14 662 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 CLCA2Q9UQC9 943 aa14.37□□□□□ -0.11
SNX6-210ENST00000557341 BPTFQ12830 3046 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 RP1P56715 2156 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 SPTY2D1-AS1A0A0U1RR47 76 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 RASA4BC9J798 803 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 SPINT1O43278 529 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 RASA4O43374 803 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 CKMT1AP12532 417 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 NME1P15531 152 aaKnown RBP14.36□□□□□ -0.11
SNX6-210ENST00000557341 TPI1P60174 286 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 INSM1Q01101 510 aaPredicted RBP14.36□□□□□ -0.11
SNX6-210ENST00000557341 SERINC3Q13530 473 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 PDE1CQ14123 709 aaPredicted RBP14.36□□□□□ -0.11
SNX6-210ENST00000557341 FZD2Q14332 565 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 ANO6Q4KMQ2 910 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 ZNF542PQ5EBM4 170 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 UMODL1-AS1Q8N2C9 162 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 ZNF548Q8NEK5 533 aaPredicted RBP14.36□□□□□ -0.11
SNX6-210ENST00000557341 VOPP1Q96AW1 172 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 VCPIP1Q96JH7 1222 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 NCAPGQ9BPX3 1015 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 BPIFA3Q9BQP9 254 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 C1QTNF7Q9BXJ2 289 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 NRSN2Q9GZP1 204 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 KLC2Q9H0B6 622 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 PARVAQ9NVD7 372 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 IPO11Q9UI26 975 aaKnown RBP14.36□□□□□ -0.11
SNX6-210ENST00000557341 AP4E1Q9UPM8 1137 aa14.36□□□□□ -0.11
SNX6-210ENST00000557341 ASXL3Q9C0F0 2248 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 A0A087WV48 116 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 LRRC53A6NM62 1247 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 EIF3CLB5ME19 914 aaKnown RBP14.35□□□□□ -0.11
SNX6-210ENST00000557341 AREL1O15033 823 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 SCAMP1O15126 338 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 TEX33O43247 280 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 CSF2P04141 144 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 TNFAIP3P21580 790 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 PSMA2P25787 234 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 E2F1Q01094 437 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 OGDHQ02218 1023 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 RTP5Q14D33 572 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 FILIP1LQ4L180 1135 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 LRRC73Q5JTD7 316 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 IRF2BP2Q7Z5L9 587 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 TTC7BQ86TV6 843 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 PDZD3Q86UT5 571 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 DCBLD1Q8N8Z6 715 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 HNRNPLLQ8WVV9 542 aaKnown RBP14.35□□□□□ -0.11
SNX6-210ENST00000557341 EXOC2Q96KP1 924 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 APOLD1Q96LR9 279 aa14.35□□□□□ -0.11
SNX6-210ENST00000557341 EIF3CQ99613 913 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms