RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ITGB6P18564 788 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 SCNN1AP37088 669 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 USP46P62068 366 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 GALNT2Q10471 571 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 KLF10Q13118 480 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 CYLC2Q14093 348 aaPredicted RBP15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 NFE2Q16621 373 aaPredicted RBP15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 TRMT5Q32P41 509 aaKnown RBP15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 PIM3Q86V86 326 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 MAGEC3Q8TD91 643 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 PANX3Q96QZ0 392 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 TRIM62Q9BVG3 475 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 SENP6Q9GZR1 1112 aaPredicted RBP15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 RGS18Q9NS28 235 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 ZDHHC2Q9UIJ5 367 aa15.5■□□□□ 0.07
TMEM55B-207ENST00000557041 ACVRL1P37023 503 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 STX1BP61266 288 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 LSM12Q3MHD2 195 aaKnown RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 GPR158Q5T848 1215 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 LRRC8EQ6NSJ5 796 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 PRSS55Q6UWB4 352 aaPredicted RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 SH2D5Q6ZV89 423 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 BBS5Q8N3I7 341 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 ATP6V0D2Q8N8Y2 350 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 OR6K2Q8NGY2 324 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 HEXDCQ8WVB3 486 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 APBB2Q92870 758 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 C11orf84Q9BUA3 381 aaPredicted RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 UBE2OQ9C0C9 1292 aaKnown RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 FAM124BQ9H5Z6 455 aaPredicted RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 KNL1Q8NG31 2342 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 HAS3O00219 553 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 HDAC3O15379 428 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 TLR5O60602 858 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 TM7SF2O76062 418 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 SREBF2Q12772 1141 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 TIGD7Q6NT04 549 aaPredicted RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 C17orf99Q6UX52 265 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 SERINC5Q86VE9 423 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 ZC3HC1Q86WB0 502 aaKnown RBP15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 CEP97Q8IW35 865 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 DBF4BQ8NFT6 615 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 OR7D4Q8NG98 312 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 FAM96AQ9H5X1 160 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 CASS4Q9NQ75 786 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 ENTPD7Q9NQZ7 604 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 LNPEPQ9UIQ6 1025 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 TLL2Q9Y6L7 1015 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 RAB27AP51159 221 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 KCNQ1P51787 676 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 KRT72Q14CN4 511 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 ICA1LQ8NDH6 482 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 GCNAQ96QF7 691 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 SERPINI1Q99574 410 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 CCSER2Q9H7U1 834 aa15.49■□□□□ 0.07
TMEM55B-207ENST00000557041 SUPT3HB4E1H0 165 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 KPNA6O60684 536 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 SUPT3HO75486 399 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 KPNA2P52292 529 aaKnown RBP15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 PFKFB4Q16877 469 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 AGAP9Q5VTM2 703 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 LIPMQ5VYY2 423 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 LINGO4Q6UY18 593 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 MON1AQ86VX9 555 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 DENND1CQ8IV53 801 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 EIF2B3Q9NR50 452 aaKnown RBP15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 KCNU1A8MYU2 1149 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 MATN3O15232 486 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 PSMD3O43242 534 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 RHOBTB1O94844 696 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 HDCP19113 662 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 CCNFP41002 786 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 MAGEA3P43357 314 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 ADAM17P78536 824 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 ZRANB3Q5FWF4 1079 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 TMEM135Q86UB9 458 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 MIEF2Q96C03 454 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 ZYG11BQ9C0D3 744 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 SHROOM3Q8TF72 1996 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 F5H5T6 163 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 KLF11O14901 512 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 AOC2O75106 756 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 NDUFS3O75489 264 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 SPATA31D3P0C874 917 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 CHRM3P20309 590 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 FMO4P31512 558 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 CDK7P50613 346 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 PRKAA1Q13131 559 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 SPATA31D4Q6ZUB0 917 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 SAPCD2Q86UD0 394 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 RTP3Q9BQQ7 232 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 MRPL46Q9H2W6 279 aaKnown RBP15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 PRDM5Q9NQX1 630 aaPredicted RBP15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 AURKCQ9UQB9 309 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 ARL5AQ9Y689 179 aa15.48■□□□□ 0.07
TMEM55B-207ENST00000557041 ZBTB14O43829 449 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms