RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CISD3P0C7P0 127 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 RHOAP61586 193 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 CDH17Q12864 832 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 KYNUQ16719 465 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 GAB4Q2WGN9 574 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 IER5LQ5T953 404 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 IQCKQ8N0W5 287 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 ATP11CQ8NB49 1132 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 FBXO36Q8NEA4 188 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 OR52K1Q8NGK4 314 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 TTC17Q96AE7 1141 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 SCUBE2Q9NQ36 999 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 ANKRD36A6QL64 1941 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 OTOL1A6NHN0 477 aaPredicted RBP24.02■■□□□ 1.44
SIX4-203ENST00000556952 INSIG1O15503 277 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 USP12O75317 370 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 BANF1O75531 89 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 MT-CO1P00395 513 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 ABHD2P08910 425 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 POLR2EP19388 210 aaKnown RBP24.02■■□□□ 1.44
SIX4-203ENST00000556952 GDI1P31150 447 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 ELK3P41970 407 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 WNT3AP56704 352 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 ECT2LQ008S8 904 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 MTM1Q13496 603 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 MBLAC2Q68D91 279 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 C12orf40Q86WS4 652 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 DNAAF3Q8N9W5 541 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 WDR83Q9BRX9 315 aaKnown RBP24.02■■□□□ 1.44
SIX4-203ENST00000556952 FICDQ9BVA6 458 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 CEP44Q9C0F1 390 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 SLC2A4RGQ9NR83 387 aa24.02■■□□□ 1.44
SIX4-203ENST00000556952 FCF1Q9Y324 198 aaKnown RBP24.02■■□□□ 1.44
SIX4-203ENST00000556952 SDR42E2A6NKP2 422 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 ACSL3O95573 720 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 CPP00450 1065 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 RGRP47804 291 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 SLC29A2Q14542 456 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 GEN1Q17RS7 908 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 GRAMD4Q6IC98 578 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 LRIG3Q6UXM1 1119 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 ANKMY2Q8IV38 441 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 SH2D3CQ8N5H7 860 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 ISG20Q96AZ6 181 aaKnown RBP24.01■■□□□ 1.43
SIX4-203ENST00000556952 EXOC2Q96KP1 924 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 SIGLEC10Q96LC7 697 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 ZIM3Q96PE6 472 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 RUFY1Q96T51 708 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 NAT9Q9BTE0 207 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 BFARQ9NZS9 450 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 DEC1Q9P2X7 70 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 CHMP2BQ9UQN3 213 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 PLAAQ9Y263 795 aa24.01■■□□□ 1.43
SIX4-203ENST00000556952 ASLP04424 464 aa24■■□□□ 1.43
SIX4-203ENST00000556952 SRCP12931 536 aa24■■□□□ 1.43
SIX4-203ENST00000556952 EIF2DP41214 584 aaKnown RBP24■■□□□ 1.43
SIX4-203ENST00000556952 MAPK8P45983 427 aa24■■□□□ 1.43
SIX4-203ENST00000556952 NPY2RP49146 381 aa24■■□□□ 1.43
SIX4-203ENST00000556952 VASPP50552 380 aaPredicted RBP24■■□□□ 1.43
SIX4-203ENST00000556952 SCNN1BP51168 640 aa24■■□□□ 1.43
SIX4-203ENST00000556952 EIF3BP55884 814 aaKnown RBP24■■□□□ 1.43
SIX4-203ENST00000556952 SIGLEC14Q08ET2 396 aa24■■□□□ 1.43
SIX4-203ENST00000556952 OLIG2Q13516 323 aa24■■□□□ 1.43
SIX4-203ENST00000556952 PCSK7Q16549 785 aa24■■□□□ 1.43
SIX4-203ENST00000556952 HP1BP3Q5SSJ5 553 aaPredicted RBP24■■□□□ 1.43
SIX4-203ENST00000556952 RANBP10Q6VN20 620 aa24■■□□□ 1.43
SIX4-203ENST00000556952 CCNJLQ8IV13 435 aa24■■□□□ 1.43
SIX4-203ENST00000556952 AGGF1Q8N302 714 aaeCLIP24■■□□□ 1.43
SIX4-203ENST00000556952 FEM1CQ96JP0 617 aa24■■□□□ 1.43
SIX4-203ENST00000556952 BRD9Q9H8M2 597 aa24■■□□□ 1.43
SIX4-203ENST00000556952 ARNT2Q9HBZ2 717 aa24■■□□□ 1.43
SIX4-203ENST00000556952 NOD2Q9HC29 1040 aa24■■□□□ 1.43
SIX4-203ENST00000556952 LRRC4CQ9HCJ2 640 aa24■■□□□ 1.43
SIX4-203ENST00000556952 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 K7ERQ8 282 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 ARNTLO00327 626 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 SPAG6O75602 509 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 AGTP01019 485 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 EPOP01588 193 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 PHBP35232 272 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 CTSOP43234 321 aaPredicted RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 CSNK1DP48730 415 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 SESN2P58004 480 aaPredicted RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 AP1S1P61966 158 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 PREPLQ4J6C6 727 aaPredicted RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 TMEM215Q68D42 235 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 TRIM67Q6ZTA4 783 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 PALM2Q8IXS6 379 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 EBNA1BP2Q99848 306 aaKnown RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 APOL2Q9BQE5 337 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 IL22Q9GZX6 179 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 TTC24A2A3L6 582 aaPredicted RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 TRIM24O15164 1050 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 SMAD6O43541 496 aaKnown RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 IGSF6O95976 241 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 ATP5BP06576 529 aaKnown RBP23.99■■□□□ 1.43
SIX4-203ENST00000556952 GSTA2P09210 222 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 MGAT1P26572 445 aa23.99■■□□□ 1.43
SIX4-203ENST00000556952 IHHQ14623 411 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms