RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 SLC10A2Q12908 348 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 SNX1Q13596 522 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 DPYSQ14117 519 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PDK2Q15119 407 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF77Q15935 545 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ARL13BQ3SXY8 428 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ARHGAP15Q53QZ3 475 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 MANEALQ5VSG8 457 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 NCBP2-AS2Q69YL0 99 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 RWDD4Q6NW29 188 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TTC27Q6P3X3 843 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 KLHDC10Q6PID8 442 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PARM1Q6UWI2 310 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 LEKR1Q6ZMV7 388 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ARHGAP36Q6ZRI8 547 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TPGS1Q6ZTW0 290 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 RFX8Q6ZV50 586 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TFAP2DQ7Z6R9 452 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TADA2BQ86TJ2 420 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 SULF2Q8IWU5 870 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 KLHL7Q8IXQ5 586 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 NPWQ8N729 165 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PLD5Q8N7P1 536 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ATP6V0D2Q8N8Y2 350 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PRELID2Q8N945 189 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 LEMD2Q8NC56 503 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 NOA1Q8NC60 698 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ZBTB44Q8NCP5 570 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 OR52K2Q8NGK3 314 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ACTRT1Q8TDG2 376 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 FAF2Q96CS3 445 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 RBM41Q96IZ5 413 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 HAPLN3Q96S86 360 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 CDK5RAP1Q96SZ6 601 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 NELL2Q99435 816 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 KXD1Q9BQD3 176 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 KLC2Q9H0B6 622 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 DDX47Q9H0S4 455 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 L2HGDHQ9H9P8 463 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ARHGEF4Q9NR80 690 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 TDP1Q9NUW8 608 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ZSCAN32Q9NX65 697 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 PLK2Q9NYY3 685 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 OR12D3Q9UGF7 316 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ARHGAP26Q9UNA1 814 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ACTL7BQ9Y614 415 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ACTL7AQ9Y615 435 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 V9GYY5 206 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 CACNA1GO43497 2377 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 MTCL1Q9Y4B5 1905 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF638Q14966 1978 aaKnown RBP5.44□□□□□ -1.54
ATXN3-244ENST00000556898 C2orf16Q68DN1 1984 aa5.44□□□□□ -1.54
ATXN3-244ENST00000556898 DOCK6Q96HP0 2047 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 TPRP12270 2363 aaKnown RBP5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ANAPC1Q9H1A4 1944 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ANTXRLA6NF34 631 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 DRGXA6NNA5 263 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 HEPACAM2A8MVW5 462 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 F5H5T6 163 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 PGRMC1O00264 195 aaKnown RBP5.43□□□□□ -1.54
ATXN3-244ENST00000556898 GFRA2O00451 464 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 KRIT1O00522 736 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 APOL1O14791 398 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 SLC30A4O14863 429 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 DCLK1O15075 740 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 TRIM24O15164 1050 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 NCAM2O15394 837 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 DAPK3O43293 454 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 TBL1XO60907 577 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 FGF19O95750 216 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 RECKO95980 971 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ETS1P14921 441 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ARSAP15289 507 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 VAV1P15498 845 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 DESP17661 470 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 DDX6P26196 483 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ARNTP27540 789 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 EPHB2P29323 1055 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ACVRL1P37023 503 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ARL4AP40617 200 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 HARS2P49590 506 aaKnown RBP5.43□□□□□ -1.54
ATXN3-244ENST00000556898 TERF1P54274 439 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 AIF1P55008 147 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 RING1Q06587 406 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 PPP2R5EQ16537 467 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 WHAMMP3Q1A5X7 153 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 ODF2Q5BJF6 829 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 TFDP3Q5H9I0 405 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 FSCBQ5H9T9 825 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 PPM1JQ5JR12 505 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 CCDC181Q5TID7 509 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 NUGGCQ68CJ6 796 aa5.43□□□□□ -1.54
ATXN3-244ENST00000556898 NAIF1Q69YI7 327 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms