RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ASCC3Q8N3C0 2202 aaKnown RBP22.85■■□□□ 1.25
PABPN1-206ENST00000556809 FAM47DPA6NHR8 397 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 MIF4GDA9UHW6 222 aaKnown RBP22.84■■□□□ 1.25
PABPN1-206ENST00000556809 APOL1O14791 398 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 PLRG1O43660 514 aaKnown RBP22.84■■□□□ 1.25
PABPN1-206ENST00000556809 PRNPP04156 253 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 CCR5P51681 352 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 RWDD2BP57060 319 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 BNC1Q01954 994 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 IL10RBQ08334 325 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 POM121L1PQ3SYA9 428 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 INO80DQ53TQ3 878 aaPredicted RBP22.84■■□□□ 1.25
PABPN1-206ENST00000556809 ARSIQ5FYB1 569 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 PIP5KL1Q5T9C9 394 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 SLC9A4Q6AI14 798 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 ARHGAP36Q6ZRI8 547 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 RFX6Q8HWS3 928 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 CCDC50Q8IVM0 306 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 SNX19Q92543 992 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 ARRDC3Q96B67 414 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 KDM4CQ9H3R0 1056 aa22.84■■□□□ 1.25
PABPN1-206ENST00000556809 UBA2Q9UBT2 640 aaPredicted RBP22.84■■□□□ 1.25
PABPN1-206ENST00000556809 DOCK9Q9BZ29 2069 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 A0A1W2PPC4 97 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 LEFTY1O75610 366 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 TMCC1O94876 653 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 SYPP08247 313 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 MAPK8P45983 427 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 RECQLP46063 649 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-206ENST00000556809 PEX5P50542 639 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 CCNHP51946 323 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-206ENST00000556809 TAS2R38P59533 333 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 GBE1Q04446 702 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 GALNT2Q10471 571 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 TFDP3Q5H9I0 405 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 ATPAF2Q8N5M1 289 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 UBL4BQ8N7F7 174 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 PLD5Q8N7P1 536 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 ALG3Q92685 438 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 ALS2CR12Q96Q35 445 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 HEPHQ9BQS7 1158 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 TM9SF3Q9HD45 589 aa22.83■■□□□ 1.25
PABPN1-206ENST00000556809 PACSIN2Q9UNF0 486 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-206ENST00000556809 KPNA3O00505 521 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-206ENST00000556809 ZSCAN12O43309 604 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 LATO43561 262 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 GJB3O75712 270 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 GSRP00390 522 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 KRT10P13645 584 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 ZFXP17010 805 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-206ENST00000556809 GRIK2Q13002 908 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 TFDP2Q14188 446 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 PPP2R5EQ16537 467 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 LRRC49Q8IUZ0 686 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 MINDY1Q8N5J2 469 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 OR2I1PQ8NGU4 316 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 GRIN3AQ8TCU5 1115 aa22.82■■□□□ 1.24
PABPN1-206ENST00000556809 GTPBP2Q9BX10 602 aaKnown RBP22.82■■□□□ 1.24
PABPN1-206ENST00000556809 DNAAF2Q9NVR5 837 aaKnown RBP22.82■■□□□ 1.24
PABPN1-206ENST00000556809 HECAQ9UBI9 543 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-206ENST00000556809 hCG_1818297A0A087WSY0 165 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3DA0A087WVF3 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3IA0A087WXS9 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3EA0A087X179 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3KA0A087X1G2 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3FA6NER0 549 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3LB9A6J9 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 MAFKO60675 156 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 MAP3K6O95382 1288 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3HP0C7X1 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 DNA2P51530 1060 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 AFF3P51826 1226 aaKnown RBP22.81■■□□□ 1.24
PABPN1-206ENST00000556809 COPS2P61201 443 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 PPP2CBP62714 309 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 DYNLT1P63172 113 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 PPP2CAP67775 309 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 LLGL1Q15334 1064 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 KAZNQ674X7 775 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3GQ6DHY5 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3CQ6IPX1 549 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TBC1D3Q8IZP1 549 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-206ENST00000556809 OR2AP1Q8NGE2 309 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 UBE2Q2Q8WVN8 375 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 HES6Q96HZ4 224 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 HDAC8Q9BY41 377 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TM6SF2Q9BZW4 377 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 ZDHHC5Q9C0B5 715 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 DTLQ9NZJ0 730 aa22.81■■□□□ 1.24
PABPN1-206ENST00000556809 TPX2Q9ULW0 747 aaKnown RBP22.81■■□□□ 1.24
PABPN1-206ENST00000556809 SHROOM3Q8TF72 1996 aa22.8■■□□□ 1.24
PABPN1-206ENST00000556809 DDX3YO15523 660 aaKnown RBP22.8■■□□□ 1.24
PABPN1-206ENST00000556809 MX2P20592 715 aa22.8■■□□□ 1.24
PABPN1-206ENST00000556809 GARSP41250 739 aaKnown RBP22.8■■□□□ 1.24
PABPN1-206ENST00000556809 GRIA4P48058 902 aa22.8■■□□□ 1.24
PABPN1-206ENST00000556809 CSNK1EP49674 416 aaKnown RBP22.8■■□□□ 1.24
PABPN1-206ENST00000556809 RHOAP61586 193 aa22.8■■□□□ 1.24
PABPN1-206ENST00000556809 RACK1P63244 317 aaKnown RBP22.8■■□□□ 1.24
PABPN1-206ENST00000556809 FOXK2Q01167 660 aa22.8■■□□□ 1.24
PABPN1-206ENST00000556809 SLC10A2Q12908 348 aaPredicted RBP22.8■■□□□ 1.24
PABPN1-206ENST00000556809 RFTN1Q14699 578 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms