RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 AGBL4Q5VU57 503 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 PARS2Q7L3T8 475 aaKnown RBP17.71■□□□□ 0.43
SHMT2-225ENST00000556798 LPCAT2Q7L5N7 544 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 OR14C36Q8NHC7 312 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 ACTL9Q8TC94 416 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 PPP1R16AQ96I34 528 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 ZC3H10Q96K80 434 aaKnown RBP17.71■□□□□ 0.43
SHMT2-225ENST00000556798 NSMCE3Q96MG7 304 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 MGME1Q9BQP7 344 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 TLR10Q9BXR5 811 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 SEMA4AQ9H3S1 761 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 RBM22Q9NW64 420 aaKnown RBP eCLIP17.71■□□□□ 0.43
SHMT2-225ENST00000556798 FZD4Q9ULV1 537 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 EFR3BQ9Y2G0 817 aa17.71■□□□□ 0.43
SHMT2-225ENST00000556798 TP53BP1Q12888 1972 aaPredicted RBP17.71■□□□□ 0.43
SHMT2-225ENST00000556798 OTOGLQ3ZCN5 2332 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 TCRBV7S2A1N4TA0A589 114 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 PRR23AA6NEV1 266 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 KCNK3O14649 394 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 ENC1O14682 589 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 NEBLO76041 1014 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 RHOBTB1O94844 696 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 TJP3O95049 919 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 LMNAP02545 664 aaKnown RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 ITGB7P26010 798 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 PI4KAP42356 2102 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 PTGER3P43115 390 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 ADPRHP54922 357 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 ITKQ08881 620 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 SFSWAPQ12872 951 aaKnown RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 PRKD1Q15139 912 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 NOMO1Q15155 1222 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 ZNF805Q5CZA5 627 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 LRRC73Q5JTD7 316 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 GDPD4Q6W3E5 623 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 BZW1Q7L1Q6 419 aaKnown RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 CAMK1DQ8IU85 385 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 SLC41A1Q8IVJ1 513 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 SLC35F6Q8N357 371 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 TFB1MQ8WVM0 346 aaKnown RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 FATE1Q969F0 183 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 LRIG1Q96JA1 1093 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 HSPA12BQ96MM6 686 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 OSBPL1AQ9BXW6 950 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 C6orf106Q9H6K1 298 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 C10orf88Q9H8K7 445 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 SGK2Q9HBY8 427 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 SCUBE2Q9NQ36 999 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 TRPM6Q9BX84 2022 aa17.7■□□□□ 0.42
SHMT2-225ENST00000556798 ATXN2Q99700 1313 aaKnown RBP17.7■□□□□ 0.42
SHMT2-225ENST00000556798 JCHAINP01591 159 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 CR2P20023 1033 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 CSNK1DP48730 415 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 TAS2R38P59533 333 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 AP1S1P61966 158 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 IFI35P80217 286 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-225ENST00000556798 DSC2Q02487 901 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 NSUN2Q08J23 767 aaKnown RBP eCLIP17.69■□□□□ 0.42
SHMT2-225ENST00000556798 LAIR1Q6GTX8 287 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 NCEH1Q6PIU2 408 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 ERN2Q76MJ5 926 aaKnown RBP17.69■□□□□ 0.42
SHMT2-225ENST00000556798 ASCL5Q7RTU5 278 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 C17orf53Q8N3J3 647 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-225ENST00000556798 FAM131CQ96AQ9 280 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 QKIQ96PU8 341 aaKnown RBP eCLIP17.69■□□□□ 0.42
SHMT2-225ENST00000556798 NUDCD1Q96RS6 583 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 HDAC8Q9BY41 377 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 CPEB1Q9BZB8 566 aaKnown RBP17.69■□□□□ 0.42
SHMT2-225ENST00000556798 CARD9Q9H257 536 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 NOD2Q9HC29 1040 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 FRYLO94915 3013 aa17.69■□□□□ 0.42
SHMT2-225ENST00000556798 ADAMTS9Q9P2N4 1935 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 C16orf96A6NNT2 1141 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 H7C0C1 242 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 SLC7A4O43246 635 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 KIF5CO60282 957 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ADRB3P13945 408 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 SERPINA4P29622 427 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 CXCR5P32302 372 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ABL2P42684 1182 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ATP5OP48047 213 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 NEK3P51956 506 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ZNF33AQ06730 810 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 KLF1Q13351 362 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-225ENST00000556798 FBXL19Q6PCT2 694 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ADAT2Q7Z6V5 191 aaKnown RBP17.68■□□□□ 0.42
SHMT2-225ENST00000556798 UBE2Q2Q8WVN8 375 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 SNX19Q92543 992 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 TUBGCP5Q96RT8 1024 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 IL12RB2Q99665 862 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 SEMA3CQ99985 751 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 POLR1EQ9GZS1 481 aaKnown RBP17.68■□□□□ 0.42
SHMT2-225ENST00000556798 BRD8Q9H0E9 1235 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 SUV39H2Q9H5I1 410 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ATP13A3Q9H7F0 1226 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 R3HDM2Q9Y2K5 976 aaKnown RBP17.68■□□□□ 0.42
SHMT2-225ENST00000556798 WDR87Q6ZQQ6 2873 aa17.68■□□□□ 0.42
SHMT2-225ENST00000556798 ZFHX2Q9C0A1 2572 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-225ENST00000556798 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms