RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 DNAJB2P25686 324 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 OR1E1P30953 314 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 OR1D2P34982 312 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 ARSDP51689 593 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TAS2R39P59534 338 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PTPRCAPQ14761 206 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SIRPB2Q5JXA9 342 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SNX30Q5VWJ9 437 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 ANKS3Q6ZW76 656 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 LDB1Q86U70 411 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 LRRC49Q8IUZ0 686 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 GPATCH11Q8N954 259 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 C2CD4AQ8NCU7 369 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 OR7D4Q8NG98 312 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SCYL1Q96KG9 808 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 NSMCE3Q96MG7 304 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PRICKLE1Q96MT3 831 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TMEM175Q9BSA9 504 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 BTBD10Q9BSF8 475 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 GATA5Q9BWX5 397 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 HIPK3Q9H422 1215 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TAS2R1Q9NYW7 299 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 UXTQ9UBK9 157 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 FBXO5Q9UKT4 447 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 GYG2O15488 501 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 GSC2O15499 205 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 BUD23O43709 281 aaKnown RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 CCDC22O60826 627 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 WFS1O76024 890 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 HSPA4LO95757 839 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 EFEMP2O95967 443 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 GRK2P25098 689 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PSEN1P49768 467 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SERPINH1P50454 418 aaKnown RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 RASSF2P50749 326 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 KDSRQ06136 332 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 IL10RBQ08334 325 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 THOC5Q13769 683 aaKnown RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PREPLQ4J6C6 727 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TSTD2Q5T7W7 516 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 FAM219BQ5XKK7 198 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 LRRC8EQ6NSJ5 796 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 ZYG11AQ6WRX3 759 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 LRRC43Q8N309 656 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SHKBP1Q8TBC3 707 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 MAPK15Q8TD08 544 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SH3RF2Q8TEC5 729 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PPP4R1Q8TF05 950 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 FATE1Q969F0 183 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TADA1Q96BN2 335 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 NXNL1Q96CM4 212 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 GPR78Q96P69 363 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 OLFM1Q99784 485 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SEMA3CQ99985 751 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TTLL2Q9BWV7 592 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 MRPL9Q9BYD2 267 aaKnown RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SHCBP1LQ9BZQ2 653 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 CWH43Q9H720 699 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 PDFQ9HBH1 243 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 NSMCE4AQ9NXX6 385 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 MTRRQ9UBK8 725 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 TLK1Q9UKI8 766 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 RUVBL2Q9Y230 463 aaKnown RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 ANKRD6Q9Y2G4 727 aa10.23□□□□□ -0.77
TMEM260-211ENST00000556648 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-211ENST00000556648 SCAMP3O14828 347 aaKnown RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 PRAMEF11O60813 436 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 DIAPH2O60879 1101 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 ENTPD5O75356 428 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 CXCL10P02778 98 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 SERPINA6P08185 405 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 PIRTP0C851 137 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 ALOX15P16050 662 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 HOXD9P28356 352 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 CD151P48509 253 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 RAB10P61026 200 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 RPS24P62847 133 aaKnown RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 RING1Q06587 406 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 ELAVL2Q12926 359 aaKnown RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 GALNT3Q14435 633 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 NEPROQ6NW34 567 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 WDR75Q8IWA0 830 aaKnown RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 FSTL5Q8N475 847 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 TEX9Q8N6V9 391 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 POU5F2Q8N7G0 328 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 PTCD2Q8WV60 388 aaKnown RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 VWCEQ96DN2 955 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 ZNF512Q96ME7 567 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 PPP1R2P1Q96PQ5 205 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 LBHD1Q9BQE6 289 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 FAM167BQ9BTA0 163 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 UBE2OQ9C0C9 1292 aaKnown RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 ARNT2Q9HBZ2 717 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 OXSMQ9NWU1 459 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 DNAJC28Q9NX36 388 aa10.22□□□□□ -0.77
TMEM260-211ENST00000556648 MARCH4Q9P2E8 410 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-211ENST00000556648 XPR1Q9UBH6 696 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms