RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 LINGO4Q6UY18 593 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 ITIH5Q86UX2 942 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 CNPY4Q8N129 248 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 PLD6Q8N2A8 252 aaKnown RBP18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 FITM2Q8N6M3 262 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 RFWD2Q8NHY2 731 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 ACMSDQ8TDX5 336 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 ADAMTS19Q8TE59 1207 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 IFT43Q96FT9 208 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 RXFP1Q9HBX9 757 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 TMEM216Q9P0N5 145 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 UBA2Q9UBT2 640 aaPredicted RBP18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 KCTD3Q9Y597 815 aa18.51■□□□□ 0.55
SDR39U1-220ENST00000556548 A0A1B0GVM2 712 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 TCAF2A6NFQ2 919 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 UBOX5O94941 541 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 LRG1P02750 347 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 AVPR1AP37288 418 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 SERPINB8P50452 374 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 ERVFC1P60507 584 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 TCF25Q9BQ70 676 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 TACO1Q9BSH4 297 aaKnown RBP18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 TREX1Q9NSU2 369 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 HIDE1A8MVS5 230 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 GLRA3O75311 464 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 C1RP00736 705 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 CKMP06732 381 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 C8AP07357 584 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 KCNA4P22459 653 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 SCNN1BP51168 640 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 HTRA4P83105 476 aaPredicted RBP18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 THOC5Q13769 683 aaKnown RBP18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 FYB2Q5VWT5 728 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 PLPP4Q5VZY2 271 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 CXorf57Q6NSI4 855 aaKnown RBP18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 HERC6Q8IVU3 1022 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 SPNS2Q8IVW8 549 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 SLC22A17Q8WUG5 538 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 E2F7Q96AV8 911 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 NSMCE3Q96MG7 304 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 CINPQ9BW66 212 aaPredicted RBP18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 ARNT2Q9HBZ2 717 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 DCDC2Q9UHG0 476 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 KIAA1671Q9BY89 1806 aa18.5■□□□□ 0.55
SDR39U1-220ENST00000556548 A0A096LPK6 155 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 A0A1W2PRU2 124 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 H0Y626 953 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 KDELR3O43731 214 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SNAP91O60641 907 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 BPGMP07738 259 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 ATXN1LP0C7T5 689 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SLC1A2P43004 574 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 BST1Q10588 318 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 PTPRCAPQ14761 206 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 ZNF470Q6ECI4 717 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 RAPH1Q70E73 1250 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SPRED2Q7Z698 418 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 ZC3HC1Q86WB0 502 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 TNS4Q8IZW8 715 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SMG9Q9H0W8 520 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 NOD2Q9HC29 1040 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 INSL6Q9Y581 213 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 CAPN7Q9Y6W3 813 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 ANAPC1Q9H1A4 1944 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 ILVBLA1L0T0 632 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 HEATR9A2RTY3 570 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 CCL16O15467 120 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 PHGDHO43175 533 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 TIMM44O43615 452 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 GSRP00390 522 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SYN1P17600 705 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 MZF1P28698 734 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SCTRP47872 440 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 CSE1LP55060 971 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 FPGSQ05932 587 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 CDK18Q07002 472 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 TNK2Q07912 1038 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 MSLNQ13421 630 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 PABPC1LQ4VXU2 614 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 FASTKD1Q53R41 847 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 SLC41A1Q8IVJ1 513 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 CCDC117Q8IWD4 279 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 BLOC1S5Q8TDH9 187 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 C10orf82Q8WW14 230 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 TADA1Q96BN2 335 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 CORO1BQ9BR76 489 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 MCMBPQ9BTE3 642 aa18.49■□□□□ 0.55
SDR39U1-220ENST00000556548 A0A0G2JND7 137 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 LOC285095A0A1B0GVY8 99 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 AURKAO14965 403 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PLIN3O60664 434 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 C2P06681 752 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 MYL4P12829 197 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PAMP19021 973 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.553e-7■■■□□ 16.1
SDR39U1-220ENST00000556548 ZNF460Q14592 562 aa18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 USP10Q14694 798 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-220ENST00000556548 TSTD2Q5T7W7 516 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms