RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 RBMS1P29558 406 aaKnown RBP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 DRD3P35462 400 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ERVPABLB-1P60509 514 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 OVGP1Q12889 678 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 PDCLQ13371 301 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 STAT4Q14765 748 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 HS1BP3Q53T59 392 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ZC3H12AQ5D1E8 599 aaKnown RBP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 CXorf57Q6NSI4 855 aaKnown RBP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 DENND1BQ6P3S1 775 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 INO80CQ6PI98 192 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 IQCHQ86VS3 1027 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 APCDD1Q8J025 514 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 LSMEM2Q8N112 164 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 OXR1Q8N573 874 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 MFSD2AQ8NA29 543 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 PHC3Q8NDX5 983 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 OR4C6Q8NH72 309 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 MAPK15Q8TD08 544 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 NELFBQ8WX92 580 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ZNF606Q8WXB4 792 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 EXTL1Q92935 676 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ALG14Q96F25 216 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 SLC2A13Q96QE2 648 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 SPAG5Q96R06 1193 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 CALN1Q9BXU9 219 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 DPH1Q9BZG8 443 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ZCCHC2Q9C0B9 1178 aaKnown RBP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 INTS2Q9H0H0 1204 aaKnown RBP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 LIN7BQ9HAP6 207 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ST7Q9NRC1 585 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 ASNSD1Q9NWL6 643 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 DMTF1Q9Y222 760 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.26□□□□□ -0.77
SCFD1-220ENST00000556486 U3KQA8 63 aa10.26□□□□□ -0.77
SCFD1-220ENST00000556486 CPED1A4D0V7 1026 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 GTPBP10A4D1E9 387 aaKnown RBP10.25□□□□□ -0.77
SCFD1-220ENST00000556486 F5H5T6 163 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
SCFD1-220ENST00000556486 ALOX15BO15296 676 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 SLC31A1O15431 190 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 BNIP3LO60238 219 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 SASH3O75995 380 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 MOCS2O96007 188 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-220ENST00000556486 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 THEGLP0DJG4 465 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 GIMD1P0DJR0 217 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CKMT1AP12532 417 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CCR1P32246 355 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 NNMTP40261 264 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CNTN1Q12860 1018 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 PAK1Q13153 545 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CDKN3Q16667 212 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 ISXQ2M1V0 245 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 LINC00303Q3SY05 128 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 C5orf22Q49AR2 442 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 RABGAP1LQ5R372 815 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 RNF219Q5W0B1 726 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-220ENST00000556486 RAP1GAP2Q684P5 730 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 TRIM65Q6PJ69 517 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 DSG4Q86SJ6 1040 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 PRPF39Q86UA1 669 aaKnown RBP10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CHSY1Q86X52 802 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 LGI2Q8N0V4 545 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CCAR2Q8N163 923 aaKnown RBP10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 ATP6V0D2Q8N8Y2 350 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 OR13H1Q8NG92 308 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 IFI44Q8TCB0 444 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 CPLX3Q8WVH0 158 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 SHC3Q92529 594 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 KLHDC7BQ96G42 594 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 NOX5Q96PH1 765 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 PPP1R9BQ96SB3 815 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 SLC12A6Q9UHW9 1150 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 SARDHQ9UL12 918 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 OR51B4Q9Y5P0 310 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 RELNP78509 3460 aa10.25□□□□□ -0.77
SCFD1-220ENST00000556486 BSNQ9UPA5 3926 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 BECN2A8MW95 431 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 MCF2LO15068 1137 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 EFSO43281 561 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 PLRG1O43660 514 aaKnown RBP10.24□□□□□ -0.77
SCFD1-220ENST00000556486 HSF2BPO75031 334 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-220ENST00000556486 PF4P02776 101 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 BMP2P12643 396 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 KRT5P13647 590 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 LIG3P49916 1009 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 CLDN2P57739 230 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 PITX1P78337 314 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-220ENST00000556486 CDK17Q00537 523 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 TGIF1Q15583 401 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 RNF187Q5TA31 235 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-220ENST00000556486 FAM46CQ5VWP2 391 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 OR6B2Q6IFH4 312 aa10.24□□□□□ -0.77
SCFD1-220ENST00000556486 KLHL10Q6JEL2 608 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms